Carya illinoinensis (pecan): 122308247
Help
Entry
122308247 CDS
T08745
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic isoform X1
KO
K02357
elongation factor Ts
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cill03012
]
122308247
03029 Mitochondrial biogenesis [BR:
cill03029
]
122308247
Translation factors [BR:
cill03012
]
Eukaryotic type
Elongation factors
122308247
Prokaryotic type
122308247
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
122308247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
S1_RRP5
EF-Ts_N
RNase_II_C_S1
ATG14
Motif
Other DBs
NCBI-GeneID:
122308247
NCBI-ProteinID:
XP_042977392
LinkDB
All DBs
Position
4:37830408..37839317
Genome browser
AA seq
1338 aa
AA seq
DB search
MTSAFQVNMMSVMPCSISNVSLIPGTTFTTRMNNCLTRVSLSRKCTKLPSSTQKYLLPLS
TSIKLLPQHGRGCSLHYISRTNTISATGIDVAVEEPGSPIPEEASGVVSEVKPDEVGSGE
KSSNDTDRSPAPTKSKRPRPVRKSEMPPVKDEELVPGAAFTGKVRSVQPFGAFVDFGAFT
DGLVHVSRLSDSYVKDVGSIVSVGQEVQVRLVEANMETGRISLTMRESDDISTLQQRKDA
PPSSDKAGAAKRNTSRPSQRKDEMKRSSKFVKGQDLQGTVKNLTRSGAFISLPEGEEGFL
PTSEESNEGFENIMGNSSLQIGQEVSVRVLRFSRGKVTLTMKREEDVAKLDLQLSQQVVH
SATNPFALAFRKNKEIASFLNERQKLDKEAEKPAIGKTPEELEEKVDQKKTGSDEVQDQP
AGSYERTVSVSSTVDEIIKDNEASSKEADVGASTLEKDASTGIADNEDEEGPASSTTQRI
DSAVQTVDKQAEVNSKVLAPEEITSMTSQVNVGAGTIDNTSINVSDDGKDPESTISSSTS
SVDGVVQTMDKAAEVSSEILVPEGSISAVTQIIEEAPPTNGLENDGKAESAGEISGKSLS
SESPVVGDVIEGQADVAVVSDDVSLEVDVGSSALDDVSTNAADDGKGPESTLSSSTSSVD
GAVQTKEKAAEASSEILAPGESISAVTQIIEEAPSLIKKTEEAPSTDGLENDEKSDSSVE
ISGKSLSSECPAVENIIEGQSDVVVVNDEINIKAPSAENDPPSTPSEDNKVGPNPDKNGS
ITGSDLQRDTPAQKTEHGEENYGSFETSGKSTHDQVLSSESQVIGELVENLVDDAKDDVQ
MPKPAAESETPDSHNEDDKVGAPEKNDSVNNSNGKTGSPSPKEGTTKAAAAISPALVKQL
REETGAGMMDCKKALSETGGDIVKALEFLRKKGLASAEKKASRATAEGRIGSYIHDSRIG
VLVEVNCETDFVARGDIFKELVDDLAMQVAACPQVQYVITEDVPKEIVNKEREIEMQRED
LLSKPEQIRSKIVEGRITKRLEELALLDQPFIKNDKLVVKDWVKQTIATIGENIKVKRFV
RYNLGEGLEKKSQDFAAEVAAQTAAKVLPKTEKEQPAVVEAKETIQKPPTVTVSAALVKQ
LRDESGAGMMDCKKALSEAGGDIEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRI
GVLIELNCETDFVGRSENFKELVDDLAMQVVACPQVQFVSTEDIPESIKNNEKELEMQRE
DILSKPENIRERIVEGRISKRLGEMALLEQPFIKNDSILVKDLVKQTVAAIGENIKVRRF
VRFTLGETVEHAKTGTEA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgcatttcaggtcaatatgatgtctgtaatgccatgctctataagcaatgtt
tcactcattcctggaactacatttacaacaaggatgaacaattgtttgacaagagtcagt
ttgtcaaggaagtgcactaaacttccatcatccacccagaagtatctgctacctttgtca
acttctattaagttgctccctcaacatggtaggggatgttctttgcattatatatcaaga
accaatacaatatcagccacaggcattgacgttgcagtggaggaaccaggttcacccatt
ccagaagaagcttctggtgtagtatcagaagtaaagcctgatgaagttggaagtggtgaa
aaatcctccaatgatacagatcgcagtcctgctccaactaagtccaaacgtccaagacct
gttaggaaaagtgagatgcccccagtaaaggatgaggaactggttcctggtgcagctttt
actgggaaagtaagatcagttcagccatttggtgcttttgttgattttggagcttttacc
gatggcctagtgcatgtttccaggttgagtgatagctatgttaaggatgttggaagtatt
gtttccgttgggcaagaggtgcaggtgagattagttgaagcgaacatggagacaggacgg
atttctctcactatgcgtgaaagtgatgatattagtaccctgcagcagcggaaagatgct
cctcccagtagtgataaggctggagctgcaaaaagaaacacttcaaggcccagccagagg
aaagatgagatgaaaaggagctcaaaatttgttaaggggcaggacctacagggcactgtg
aagaatttgacaaggtctggtgcttttatatcccttcctgagggggaagaagggttcctc
cccacatcagaggaatctaatgaaggatttgaaaacattatggggaactcttcacttcag
attggccaagaagtcagtgtccgggtgttgcgcttctcaagagggaaggtaacattgaca
atgaagagggaagaagatgttgcaaagttggacttacagcttagccaacaggttgtccat
tctgcaacaaacccttttgcgctagctttccgtaaaaacaaggagattgcttcatttttg
aatgagaggcaaaagttagacaaagaagctgaaaaaccagcgataggaaagactccagaa
gaattagaagaaaaagtcgaccaaaaaaaaactgggtctgatgaagtgcaggaccaacca
gcaggcagctatgagagaacagttagtgtctcttctacagtcgatgaaataattaaagac
aatgaagcttcttcaaaggaggcagatgtgggagccagcacattagagaaggatgcctca
accggtattgcagacaatgaagatgaagagggcccagcctctagcactacacaaagaatt
gacagtgctgtccaaactgtagataaacaagcagaggtgaattctaaagtactggctcct
gaagagatcacgtcgatgacttcacaggtaaatgtgggagctggcacaatagataataca
tccatcaatgtttcagatgatgggaaggatccagaaagcactatctctagctcaacatca
agtgtagatggggttgttcaaaccatggataaagcagcagaggtgagttctgaaattctg
gttcctgaaggaagtatatctgctgttacgcagataattgaagaggcacctccaacaaat
ggactagaaaatgatggaaaagctgagtcagctggtgaaatatctggcaaaagcttgtct
tcagaaagtccagtagtgggagacgtaatagagggtcaagctgatgtcgctgtagtcagt
gatgatgtgtctttagaggtagatgtgggatccagtgctttagatgatgtgtcaaccaat
gctgcagatgatggaaagggtccagaaagcactctctctagttcaacgtcaagtgtggat
ggtgctgttcaaaccaaagagaaagcagcggaggcgagttctgaaattttggctcctgga
gaaagtatatctgctgttactcagataattgaagaggcaccttcccttatcaagaaaact
gaagaggcaccttcaaccgatggactagaaaatgatgaaaaatctgactcatctgttgaa
atatctggtaaaagcttgtcttcagaatgtccagcagtggaaaacataatagagggtcaa
tctgatgtcgttgtagtcaatgatgagattaatataaaagcacccagtgcagagaatgat
cctcctagcacaccaagtgaagataacaaggtgggacccaaccctgataaaaatggaagt
ataacgggctcagatttacaacgagacacccctgcccagaaaactgaacatggagaggaa
aattatggaagttttgaaacatctggaaagtcaacacatgatcaagttctctcatcagaa
agtcaagttattggagaacttgtagagaaccttgttgacgatgccaaagatgatgtacag
atgccaaagcctgctgcagagagtgaaactcctgactcgcacaatgaagatgacaaggtg
ggagcccctgagaaaaatgacagtgtcaacaattcaaatggaaaaactggcagtccttcc
cccaaggaggggacaactaaagctgcagctgctatatcaccagctcttgtgaagcagctg
cgtgaagaaacaggagctggaatgatggattgcaagaaagctctctcagagactggaggg
gacattgttaaagctctggagttcctaagaaagaaaggcttagcaagtgcagaaaagaaa
gcaagcagagccactgctgaaggaaggatagggtcgtatatccatgatagcaggattggt
gtcttggtagaggtgaattgtgagacagattttgtggcccggggtgacatttttaaggag
ctggttgacgatctggccatgcaagtggctgcatgccctcaggtgcagtacgtcattaca
gaagatgttccaaaagaaattgtgaacaaagaaagagagattgagatgcagagggaggat
ctattgtcaaaaccagagcaaatcagatcaaagatagttgaagggagaatcacaaagagg
ctcgaggagctggcattacttgatcagccattcatcaagaatgacaagttggtggtcaag
gactgggtgaagcagaccatcgcgaccataggagaaaatataaaagtgaagaggttcgtg
cggtacaatcttggagagggcttggagaaaaaaagccaagattttgctgctgaagtggca
gcccaaactgcagcaaaagtgctacccaaaacagaaaaagaacagcctgctgtagtagaa
gccaaggaaactattcagaagccaccaacagttacagtgtctgctgcattggttaaacaa
ctacgagatgaatctggagcagggatgatggactgcaagaaagctctttctgaagccgga
ggagatattgagaaggcacaggagtaccttaggaaaaagggtctttcaactgctgacaag
aaatcgagccgtcttgcagctgaaggcagaattgggtcctacattcatgactcccgcata
ggagtgctaatcgaactgaactgtgagactgactttgtaggtagaagtgaaaatttcaag
gagttggttgatgatctggcaatgcaagttgtggcctgcccgcaggtgcaatttgtatcc
accgaggatattccggagagcattaagaacaatgagaaagagctagagatgcagagagag
gacatcttatcaaaacccgagaatattagagagagaattgttgaggggaggatctcaaag
aggcttggagagatggctctgttggagcagcccttcattaagaatgatagtattttggtg
aaggacttggtgaaacaaactgtagctgcaattggggagaacataaaagttagaaggttt
gtccggttcacccttggggaaacagttgaacatgcaaaaacaggaactgaagcatga
DBGET
integrated database retrieval system
