KEGG   Carya illinoinensis (pecan): 122308297
Entry
122308297         CDS       T08745                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03010  Ribosome
cill04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122308297
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122308297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:cill03011]
    122308297
   04121 Ubiquitin system [BR:cill04121]
    122308297
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cill04147]
    122308297
Ribosome [BR:cill03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    122308297
  Archaea
    122308297
Ubiquitin system [BR:cill04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122308297
Exosome [BR:cill04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122308297
  Exosomal proteins of colorectal cancer cells
   122308297
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 122308297
NCBI-ProteinID: XP_042977479
LinkDB
Position
4:complement(2307407..2308168)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagaccataaccttagaggttgagtcctca
gacaccatcgacaatgttaaggccaagatccaagacaaggagggtatcccgccggaccag
cagcggctcatcttcgctgggaaacagctcgaggatggccgaaccttagccgattacaac
atccagaaggagtccactctccacctcgtgcttcgtctcaggggaggggccaagaagcgc
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctc
gctgtgctccagttttacaaggtggatgactctgggaaggtccagaggttgagaaaggaa
tgccccaatgcggagtgtggggctgggaccttcatggccaaccattttgaccggcactac
tgtgggaagtgtgggttgacctatgtttaccagaaggccggtggcgattag

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