Carya illinoinensis (pecan): 122308379
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Entry
122308379 CDS
T08745
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122308379
04075 Plant hormone signal transduction
122308379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122308379
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122308379
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122308379
NCBI-ProteinID:
XP_042977596
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Position
4:40365527..40369037
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AA seq
633 aa
AA seq
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MSTLVNYRGEDELCLGGSFSIGSHVDMYCPPSKRARIDTLFNFGGNGFEQDEKPSIEVLP
EECLFEIFRRLPEGKERSSCACVSKRWLMLLSNIRKAENCKEVSASNDVDMVTSDEDPDL
ESDGYLSRCLDGKKATDIRLAAIAVGTRARGGLGKLSIRGNNSPRGVTDLGLSAVAHGCP
SLKVLSLWNTFSVGDDGLSEIAKGCHLLEKLDLCHCPSISNKGLIAIAENCPNLIALNIE
SCSNIGNEGLQAIGRSCTKLQIVSVKDCPLVRDHGISSLLSSALVLSKVKLQSLNITDFS
LAVIGHYGQAITNLVLGGLQNVSEKGFWVMGIAQGLQKLASLSVTSCRGVTDVSLEAIGK
GCINLKQMCLRKCCFVSNDGLVAFAKAAGSLESLQLEECNRVSQLGVIGALSNCGTKLKS
LTLVKCLGIRDVPMGFPVPSPCTSLRSLSIRNCPGFGSASLAMVGKLCPGIQHVDLTGLH
GITDSGLLPLLESCDAGLVKVILSSCLNLTDEVILALTRLHGGTLELLNLDGCRKITDAS
LVAIADNCLLLNDLDVSKCAITDCGIEVLSCAEQLNLQVLSLSGCSEVSNKSMPFLEKLG
KTLMGLNLQHCNSISSGTVELLVESLWRCDILS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccctcgtcaattatcgtggtgaagatgaattatgtcttgggggctctttttca
attggttcccatgtggacatgtactgccctcctagcaagcgggctcggattgatacccta
ttcaactttggaggaaatgggtttgagcaggatgagaaaccttccattgaagttcttcct
gaggaatgtctatttgagatattcagacgcctccctgaaggcaaagagaggagctcctgt
gcttgcgtctccaagcgttggcttatgctcctgagtaacatccgtaaggctgaaaattgc
aaggaggtgtctgcttctaatgatgttgatatggtcactagtgatgaagatccagatctt
gaaagtgatggttaccttagcaggtgtttggacgggaagaaagctaccgatataagactt
gcagcaattgcagttggaaccagggcccgtggggggctaggaaagctgtccatccgagga
aacaattctcctcgtggagtcactgaccttggcctctctgctgttgcccacggttgccct
tctctcaaggttctttccttgtggaatactttttctgtaggggatgatggcctatctgag
attgctaaaggatgccatttgttggagaagcttgacctttgccactgtccctcaatatct
aacaaggggttgattgcaattgcagagaactgccctaatttgattgcattgaatatcgaa
tcatgttcaaatattgggaacgagggcttgcaagcaattggaaggtcttgcaccaagctg
cagattgtctctgtcaaagactgcccccttgttagggatcatggaatatcaagtctcttg
tcatcagctcttgtcctgtcaaaggtaaagctgcagtccttgaacatcacagatttctcc
cttgccgttattgggcactatggccaagccattacaaatctagtccttggtggtctacaa
aatgtgagtgagaagggcttttgggtcatgggtattgctcagggtctacaaaaactggca
tctttgtcagttacttcttgtcggggggtaacagatgtgagtcttgaagccattggcaag
ggatgcatcaacctgaagcagatgtgccttcgcaaatgttgctttgtatcaaacgatgga
ttggtagcttttgctaaagctgcaggatcactggagagcctgcagttggaagagtgtaac
agggtctcccaactaggggttattggcgccctctcaaactgcggaaccaagttgaagtct
cttaccctagtgaagtgcttgggaattagggatgtgcctatggggtttcctgtgccctct
ccctgcacatctcttcgatcattgtccattcgaaattgccctgggtttggtagcgctagt
ctggccatggtgggtaagttgtgccctgggattcagcacgtagacctgactgggcttcat
ggaataacagactctgggcttctccctcttctagagagctgcgacgcaggacttgtcaag
gtgatacttagcagctgcttgaatttgacagatgaagtaattttggccttgactaggcta
catgggggaacccttgaactgctgaatcttgatgggtgcaggaagatcactgatgcgagc
ttggtggcaattgctgacaattgcctgttactcaatgatctagatgtctcaaagtgtgct
atcactgattgtggcatcgaagtgctttcttgtgcagaacagctcaatttgcaggtcctt
tcattgtcgggatgttctgaagtgtcaaacaagagcatgcctttcttggagaaattgggg
aagaccctgatggggttgaatcttcaacactgcaattcaatcagcagtggcaccgttgaa
ctgcttgtggagagcttgtggagatgcgatattctctcttaa
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