KEGG   Carya illinoinensis (pecan): 122308383
Entry
122308383         CDS       T08745                                 
Name
(RefSeq) RING-H2 finger protein ATL78-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122308383
Enzymes [BR:cill01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122308383
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    122308383
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-ANAPC11 FANCL_C zf-RING_16 zf-RING_5 DUF116 zf_RING_Vps8_fungal zf-RING-like
Other DBs
NCBI-GeneID: 122308383
NCBI-ProteinID: XP_042977607
LinkDB
Position
4:complement(9375525..9376405)
AA seq 227 aa
MSASTSAPNRELLQADSAGDFYSRRLLLPYKFYQPPTMATPPATGNGHESLETNAGDKSF
DANVVMVLSVLLCALICSLGLNSIIRCALKWSNMVAFESGTTGNASARKAVTGVKRKAVR
SFPTVIFSPELNLPGLDTDCAICLTEFVAGERVRLLPKCNHGFHVRCIDKWLSSHFSCPK
CRHCLIETCEKIAGRSQASSSEQPPTVEEVAVSIAALEPEGLIRAYL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgcttctacttccgcacctaatcgtgagctgctccaagctgattctgcaggagac
ttttactcgaggagattgctcctgccctacaagttttaccagccaccgactatggcaact
cctcctgccactggaaatggccacgagtcgctggaaaccaacgcgggtgacaaaagtttc
gacgcaaatgttgtcatggtcctctcagtcctcttgtgcgcactgatttgctctttgggg
ttgaattctataatcaggtgtgccttaaagtggtcaaatatggtagccttcgagtccggt
actactggaaatgcctcggctcggaaggccgttactggggtgaagagaaaagccgtcagg
tctttcccgacggtaatcttttcgcctgagctgaacctgccgggcttggacaccgattgt
gcaatatgcctaacggagttcgtggcaggcgagcgtgtgcgccttctgcccaaatgcaac
cacggttttcatgtccggtgcatcgataaatggctaagttcgcatttctcgtgcccaaaa
tgcagacactgccttatcgagacatgcgaaaagatcgccggccgcagccaggcaagctca
tcggaacagcccccaacagtggaagaagtcgctgtaagcatcgcagcactggaacctgaa
ggtttgattcgtgcttacttatag

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