Carya illinoinensis (pecan): 122308399
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Entry
122308399 CDS
T08745
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122308399
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122308399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Viral_NABP
Motif
Other DBs
NCBI-GeneID:
122308399
NCBI-ProteinID:
XP_042977631
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All DBs
Position
4:complement(40678225..40689736)
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AA seq
716 aa
AA seq
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MYRCSGYAVLIPPKTDQSCLLGRSLHSSVSLFFIISASSQTGPAFVTKKNLPLSHKSLAM
QETELQDLSDDADYAASQLQGSVSMVRSDSRKQSSSSEPDGAEIVYLKDNVTIHPTQFAS
ERISGRLKLIKQGSSLFMTWIPYNGQSSNAKLSEKDRNLYTIRAVPFTEVRSIRRHTPAL
GWQYIIVVLSSGLAFPPLYFYNGGVKEFLGTIKQHVFLVRSAEGSNVFLVNDFQNPLQRT
LSSLELPRAVSLASEPSMSISVGESPLNDDQGRADGEVCNESSNISQNNVMQRQKAHDPA
RDLSIQVLEKFSLVTKFARDTTSQLFRESHDNGYGAIERRSHNQSSLDFPQRTSNIEEKA
PKEIPVASDPWVDKLTLVWGKPRLPPLGPDEWSMLLDSEGRIMDSKALRKRIFYGGMEHG
LRKEVWAFLLGYHRYDSTYAEREYLRSLKKTEYETIKIQWQSISPEQAKRFTKFRERKGL
IEKDVIRTDRSQFFYDGDDNANVNLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMDDE
SEAFWCFVALMDRLGPNFNRDQNGMHSQLFAVSKLVELLDSPLHNYFKQNDCLNYFFCFR
WLLIQFKREFEYEKTMLLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKF
INELSGHIDLDSILRDAEALCICAGENGAASIPPGTPPSLPVDDGILYTQLDDDVL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtacagatgtagcgggtacgctgtcctgattcctccaaaaacagatcaatcttgcttg
cttggtcggtccctccactcctctgtgtctttgttttttattatctctgcttcctcgcaa
acaggccctgccttcgtgactaagaaaaacctccctctctctcacaaatccctggcgatg
caagaaaccgagctgcaagatttgtccgacgatgcggattatgcagcgtcacagctacaa
gggtcggtgagcatggtgcgaagcgatagccgcaaacagagctcgtcgagtgagcccgac
ggtgccgaaatcgtttatctgaaggataatgtgacaattcatccgacgcagttcgcttca
gagaggatcagtgggcgattgaaactgattaagcaaggctcttctctctttatgacgtgg
attccatacaacgggcaaagctcgaatgcgaagctgtctgagaaagataggaatctttat
accataagggcagtcccttttacagaggtgcggtcgattcggaggcacaccccggcactc
gggtggcagtacattatcgttgttttgtcatcgggacttgcttttcctccactgtacttc
tacaatggaggagtcaaagagtttctcggtaccataaagcaacatgtttttcttgtgagg
tctgcagaaggttcaaatgtatttctagtgaatgattttcaaaatcctctccagagaact
ttgtcttctttggagctgcctagggctgtttctcttgctagcgagccatctatgtccatt
tcagttggcgagtcccctttaaatgatgatcaggggagagctgatggtgaggtttgtaat
gagagttccaatatttctcaaaacaatgtgatgcaaaggcaaaaggctcatgatcctgct
cgagatctctcaattcaagtattggaaaaattctctcttgtgaccaaatttgcccgggat
acaacttcacaactcttccgtgaaagtcatgataatggatatggtgcaattgagaggaga
agccataatcagtcttcccttgatttccctcaaaggacatccaacattgaagaaaaagct
cccaaagaaatccctgtggcatcagatccttgggttgataaattaacactggtatgggga
aaaccacgcctgccacctttggggcctgatgagtggtccatgctcttggattctgaaggg
agaatcatggattcaaaagctttaagaaagagaatattttatgggggaatggagcatgga
ttacggaaggaggtatgggcattcttgcttggataccatcgctatgattcaacatatgct
gagagggaatatcttaggtcccttaaaaagacagagtatgagaccataaagattcagtgg
cagagtatctcccctgaacaggcaaaaagatttacgaaatttcgggagagaaaaggcctt
attgaaaaagatgtgataaggactgacagatcgcaattcttctatgatggggatgataat
gcaaatgtgaatctgttgcgtgatattttgctaacatactcattctacaacttcgatctt
ggttactgccagggtatgagtgatctcttgtccccaatattgtttgtaatggatgatgag
tcagaggcattttggtgttttgttgcactgatggatcggcttggacccaatttcaatcgt
gaccaaaatggcatgcactctcaactttttgcagtatccaagttggtggaattgttagac
agcccattgcataactattttaagcagaatgactgcctcaactatttcttttgttttcgc
tggcttctaatacaattcaaaagggaatttgaatacgagaaaacaatgctgttatgggag
gtattgtggactcattatttgtcggagcacctacacctgtacgtatgtgtggcaatattg
aagcgatatcgcaataaaataatgggggagcagatggacttcgacactctcttgaaattc
attaacgaactgagtggtcacatcgacctggattcaatcctccgggatgcagaggctttg
tgcatatgtgctggtgagaatggcgcggcttccattcctcctggaacccctccctcattg
cctgttgatgatggtattttatacactcaactagacgacgacgtcctgtaa
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