Carya illinoinensis (pecan): 122308454
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Entry
122308454 CDS
T08745
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122308454
03021 Transcription machinery [BR:
cill03021
]
122308454
Transcription factors [BR:
cill03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122308454
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
122308454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zap1_zf1
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
122308454
NCBI-ProteinID:
XP_042977718
LinkDB
All DBs
Position
4:1229639..1232713
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AA seq
366 aa
AA seq
DB search
MEEIGEMEKPIFRDIRRYFCDFCGICRSKKSLITSHILAHHKEEMGEIEVDGEEKIKGNK
SNACSECGAAFSKPAYLKQHMQSHSLERPYTCPVDDCHSSYRRKDHLTRHLLQHQGKLFK
CPIERCSLEFSFQGNMKRHMKEFHREDCSSPHAECQKQYICQEIGCGKVFRFASKLQKHE
DSHVKLDSVEAFCSEPGCMNYFANGKCLKAHIQSCHQHITCEICGTRQLRKNFKRHQRTH
KSAGSLERIKCNYKGCLQTFSNKSNLRQHMKAVHLELKPFACSFSGCGMRFAHKHVRDNH
EKTGNHVYTLGDFEESDERYQSRPKGGRKRRYPMVEMLIRKRVTPPSQSEEGSDYLSWLL
AQTIED
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattggagagatggaaaagccgatattcagagacattaggcgttatttctgt
gatttttgcggcatctgcaggtccaagaagtcccttattacctctcacatcctcgctcat
cacaaggaagagatgggagaaattgaagttgatggggaagagaaaataaagggaaataaa
tctaatgcttgctcagaatgtggggcagctttcagtaaacccgcgtatctgaagcaacac
atgcaaagtcattcacttgagaggccgtatacttgtccagttgatgattgccattccagt
tacagaagaaaggaccacttgactcgtcatcttcttcagcaccaaggtaaactatttaag
tgtccaatcgagagatgcagccttgaattttcattccaaggcaacatgaaaaggcacatg
aaagaattccatcgcgaggattgctcttcccctcatgctgaatgccagaagcagtatatc
tgccaggaaataggttgcggaaaggttttcagatttgcgtcaaagctgcaaaagcatgag
gactcccatgttaaactagactcggtggaggcattctgctccgagcctggttgtatgaat
tattttgcaaacggtaaatgccttaaggcccacatccagtcctgccaccaacatattact
tgtgagatatgtggcaccaggcagctgagaaagaactttaagcgacaccagcgaacacat
aaatccgcaggttcattggagagaatcaaatgcaattacaagggttgtcttcaaactttt
tcaaataaatcaaatctccgtcagcacatgaaggccgtccaccttgaacttaaacctttt
gcctgtagcttttctggttgtggcatgaggttcgcacataagcatgttagagataatcat
gaaaagacagggaaccatgtttatacacttggggactttgaagaatcagacgagagatat
caatccaggcctaagggtgggcgaaagaggaggtacccaatggtagaaatgctgattcgg
aagagggttactccaccgagtcaatccgaagagggatctgactacctttcttggttgctc
gcccagacgattgaggattag
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