Carya illinoinensis (pecan): 122308527
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Entry
122308527 CDS
T08745
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122308527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122308527
03036 Chromosome and associated proteins [BR:
cill03036
]
122308527
03400 DNA repair and recombination proteins [BR:
cill03400
]
122308527
Enzymes [BR:
cill01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
122308527
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122308527
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122308527
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122308527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BBS7_hp
PTCB-BRCT
BRCT_3
Motif
Other DBs
NCBI-GeneID:
122308527
NCBI-ProteinID:
XP_042977830
LinkDB
All DBs
Position
4:42781766..42791879
Genome browser
AA seq
996 aa
AA seq
DB search
MANPPKPWKAEYAKSSRSSCKTCKSAIDKEVFRLGKMVQATQFDGFMPMWNHATCILKKA
KQIKSIDDVEGIELLRWEDQQKIRKYVEGSGSPASTAVTTTECGIEVAQFSRATCKQCSQ
KIMKGEVRISIKPDGQGARGLVWNHANCFLESSPSTEVEKLSGWKSLSASDQAAVSTVAN
KVPSNAKGGTEIKIEETKELLQQSTSKAGIKRKKDVQGDQNPKVAKAAGDTSASRAAYKE
YAANSIDERPKGTDLDSKLETQSKELWALKDDLKKHVTTAELRQMLEANDQDSTGSELDL
RERCVDAMMFGALSSCPICAGSLRYSGGLYRCHGFLSAWSKCSYSTREPERLKGKWKVPE
EINNQYLSKWFKSQKKTKPVRILPPPAYDNSSGSQAINRSSQSAKSESLGDLRVAVSGLP
KESMEKFKRKIEGEGGLVHTKIKKDTNCLVVSGVLDDQNAETRKARRMKLPIVREDYLVD
CVKKQKKLPFDSYKVEAIGESSSMVTVKVKGRSAVHESSGLQDTGHILEEGKIIYNTTLS
MSDLSTGVNSYYILQIIQDDKGSDCYVFRKWGRVGNEKIGGTKLEEMSKSDAIHEFKRLF
LEKTGNPWEAWAQKQNFQKQPGRFFPLDIDYGVTKQVSKNRKNDAASNLAPELVELMKML
FNVETYRAAMMEFEINMAEMPLGKLSKRNVQKGFEALTEIQNLLNNNAHDPSVKESLIID
ASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQEIEIASRLVGFDADSDDSLDEKYMKL
QCDITPLPHDSEDYRLIEKYLLTTHAPTHKDWTLELEEVFSLERKGEFDKFAPYRERLKN
RMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTDKKNPV
GLMLLSEVALGEVYELKKAKYIEKPPEGKHSTKGLGKNIPLESEYARWRDGIVVPCGKPV
PSKLKASELMYNEYIVYDTAQVKMQFLLKVKFHHKR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctccgaagccatggaaggcggagtacgccaagtcgtcgcgatcgtcgtgc
aaaacatgcaagagcgccatcgacaaagaggttttccgccttggcaagatggtccaggcc
actcaattcgacggcttcatgcccatgtggaaccatgctacttgcatactgaagaaagca
aagcagataaaatccattgatgatgttgaaggcattgagttgcttcgttgggaagatcag
cagaagatcaggaagtatgtggagggcagtggatcccctgctagcactgctgtcacaact
acagaatgcggtattgaagttgcacaattttctcgtgctacctgcaagcagtgcagccaa
aagattatgaaaggagaggttcgtatatcaatcaagcctgatggccaaggagctaggggc
ttggtgtggaaccatgccaactgttttctggaatcatctccatctaccgaagtggagaag
ttgtctggatggaagagcctctcagcttctgaccaggcagctgttagcactgtggctaat
aaggttccttctaatgcaaagggtggcactgaaattaagatagaagagactaaagaactc
ctgcaacaatcaacttccaaagctggcataaaacgtaaaaaagatgttcaaggtgatcag
aatccaaaagttgctaaggctgcgggagacacatcggcaagcagggctgcatataaggag
tatgctgccaactccattgatgaacgtccaaaaggaactgatttggatagtaaactggag
acccaaagtaaagaactgtgggctctgaaagatgatttgaagaaacatgtgacaacagca
gagttgcgtcaaatgcttgaagccaatgatcaagattcaacaggatcagaacttgatttg
cgtgaacgctgtgtggacgcgatgatgtttggagcgctttctagctgcccgatttgtgct
ggttctcttcgttattctggaggcttgtaccggtgccatggtttcttatccgcatggagc
aagtgctcttactccactcgtgaaccagaacgtctgaaagggaagtggaaagtcccagaa
gagatcaataatcaatatcttagcaagtggtttaaatcacaaaagaagacaaaacctgtt
cggatactgcctccaccggcatatgacaattcttctggaagtcaagctattaaccgcagc
tctcaatcagcaaagagtgaaagtttaggagacttgagagttgctgtatctggattaccc
aaggaatccatggaaaaattcaagagaaaaattgagggagagggtggacttgttcatacc
aaaataaagaaagatactaactgcttggttgtgagtggagtgctggatgatcaaaatgct
gagaccaggaaagcaaggaggatgaagttaccaattgttagagaggattacttggttgat
tgcgttaaaaaacagaagaagcttccatttgattcatacaaagttgaagccattggtgag
tcatctagcatggttaccgtcaaagtaaaagggcgaagtgctgtgcatgaatcttctggc
ctccaagatacgggtcacatacttgaggaagggaaaataatctataacacgactttgagc
atgtctgatttgtcaactggtgttaatagttactatatcctccaaataatccaagacgac
aaagggtctgattgctatgtgtttcgtaaatggggtcgagtgggaaacgaaaaaattgga
ggaaccaaattggaagagatgtcaaaatcagatgcaattcatgaattcaagcgtttgttc
cttgagaagactgggaatccgtgggaggcatgggcacaaaaacaaaattttcagaagcaa
cctggcagattttttccattggatatagactatggagttaccaaacaggtgtctaagaat
agaaagaatgatgcagccagcaatcttgcccccgaattagtagaattgatgaagatgctc
tttaatgtggaaacatacagggctgccatgatggaatttgagattaatatggctgaaatg
ccactgggaaaactgagcaaaagaaatgtccaaaagggttttgaggcgttaactgaaata
cagaacctgctaaataataatgctcacgatccttctgtcaaggaaagcttgattattgat
gccagcaatcgttttttcactatgatcccttccattcacccacatattattagagatgag
gatgatttcaagtcaaaggttaaaatgttagaagctctccaggaaattgaaatagcatcc
agattagtaggttttgatgctgatagtgatgactcgctagatgaaaagtatatgaaactc
caatgtgatattactccccttcctcatgatagtgaagattatcgattgattgagaagtat
ctacttaccactcatgcccctacacataaggattggactcttgaactggaagaagttttc
tcacttgaaaggaaaggagaatttgataagtttgctccctatcgagaaaggcttaagaac
aggatgctcctttggcatggttctcggttgacaaattttgtgggaatacttagccaggga
ctgagaatagctcctcctgaagctccagcaactggctatatgtttggaaaagggatatac
tttgctgacctggtcagtaagagtgctcagtattgctacaccgataagaaaaaccctgtt
ggcctaatgcttcttagtgaagttgctttgggggaggtctatgagctcaagaaggccaaa
tatatagaaaagccccctgaaggaaagcattctacaaaaggacttggcaagaatatacct
ctggagtcggaatatgcaaggtggagggatggcattgttgttccatgcggaaaacctgtg
ccatcaaaactgaaggcctctgagctgatgtataatgagtacattgtttatgatacggct
caagtcaagatgcagttcttgttgaaggtgaagttccatcacaagagatga
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