Carya illinoinensis (pecan): 122308808
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Entry
122308808 CDS
T08745
Name
(RefSeq) thioredoxin-like protein YLS8 isoform X1
KO
K12859
U5 snRNP protein, DIM1 family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122308808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122308808
Spliceosome [BR:
cill03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122308808
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
DUF3192
Motif
Other DBs
NCBI-GeneID:
122308808
NCBI-ProteinID:
XP_042977974
LinkDB
All DBs
Position
5:complement(28551488..28554068)
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AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgctgccgcacctgcactccggatgggctgtagatcaggccatcctagcc
gaggaagagcgactcgtcgtcatccgtttcggccatgactgggatgagacttgcatgcag
atggatgaagtgctagcatctgttgctgagacaattaagaactttgctgtaatatatctt
gtagacattaccgaggtgcctgatttcaacacaatgtacgagctgtatgacccatccaca
gtcatgttcttcttccgaaacaagcacattatgattgaccttggcactggaaacaacaac
aagattaactgggctatgaaggacaagcaagagttcatcgacatcgtggagacggtgtac
cgtggcgcaaggaagggtcgtggtttggtgattgcaccgaaggactactccaccaagtat
cgctactaa
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integrated database retrieval system
