Carya illinoinensis (pecan): 122308897
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Entry
122308897 CDS
T08745
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122308897
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
122308897
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WD40_Gbeta
NBCH_WD40
Beta-prop_HPS5
TFIIIC_delta
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
122308897
NCBI-ProteinID:
XP_042978108
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Position
5:45734027..45743407
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AA seq
838 aa
AA seq
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MSMNGGVEVKRLFIGAGCNRIVNNVSWGACDLVAFGAQNAVAIFCPKTAQILTTLPGHKA
SVNCTQWLPSNKFSFKAKQLERHYLLSGDADGVIILWELCLLDRKWRYVLQVPQSHKKGV
TCITGIMVSETEAIFASTSSDCTIHVWEVLFPSTTGGDCKLLCLESLFVGLKPMVALSLA
ELPGNTGHLVLAMGGLDNKIHLYCGERTGKFLHACELKGHTDWIRSLDFSLPICTKDEAK
SILLVSSSQDKGIRIWKLALRSSLGSTQGAYRSEEISLASYIEGPMFVAGPSSYQISLES
LLIGHEDWVYSVEWQPPLTASVEGIDYHQPQSILSASMDKTMMVWQPERTSGIWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGVNLDNWQPQKVPSGHFAAVADV
AWARSGEYILSVSHDQTSRIFASWKNEASSDGDSWHEIARPQVHGHDINCVTIIRGKGNH
RFVSGADEKVARVFEAPFSFLKTLNHATSQSSSFSEDIQVDVQILGANMSALGLSQKPIY
LQATHETPYRSGNDGLDSLETIPDAVPAVLTEPPIEDQLAWHTLWPESHKLYGHGNELFS
LCCDHEGKLVASSCKAQSAMVAEIWLWQVGSWKAVGHMQSHSLTVTQMEFSHDDNMLLAV
SRDRQFSVFTIKRTGNNEVSYQLVARQEAHKRIIWSCSWNPHGHEFATGSRDKTVKIWAV
DKGSSVRQLLTLPQFNSSVTALSWFGFGRQGNDGFLAVGMESGLIELWSLSVKRTDDGSI
AAAGVATASVVQLDPFMCHVSAVNRLAWKNTKREDSRSMQLASCGADHSVRVFEINVV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaatgggggggttgaggtgaagagattgttcatcggagcaggatgcaacaga
atagtgaacaacgtgtcgtggggcgcctgtgatttggtggcctttggtgcccaaaatgct
gtagctatattctgccccaagactgctcaaatcttgaccacgcttccgggtcacaaggcc
tctgtaaactgcactcagtggcttccaagtaataaattttcatttaaagctaaacagtta
gagaggcactatctgctctctggggatgctgatggtgtcattatcttatgggaactatgt
ctccttgacagaaagtggaggtatgtgttacaagtaccacaatcacacaagaagggcgtc
acatgcattactggaattatggtttctgaaaccgaggcaatctttgcctctacttcgtca
gactgtacgatccatgtatgggaagtgttgtttccatctactactggaggtgactgcaaa
ttgctttgtctggaatctctctttgttggtttgaaaccaatggtagcactttcattagca
gaattgcctggaaatactgggcatttagttctagcaatgggaggattagataacaagatt
catctatactgtggggagaggactggaaagtttcttcatgcttgtgaattaaaagggcac
acggattggatccgaagtctggacttctcattacctatatgcaccaaggatgaagcaaaa
agtattctactagtaagttcgtctcaggacaaaggcatacgcatatggaaactggctcta
cggagttctcttggcagcactcagggtgcatacaggagcgaagaaataagcctagcatct
tatattgaaggccctatgtttgtagctggcccatcctcgtatcaaatatctttagaatct
cttctaattggacatgaagattgggtatattcagtggagtggcaaccccctttaactgca
tctgtagaaggaattgactaccatcaacctcaaagtatcttatctgcatctatggacaag
acaatgatggtctggcaacctgaaaggacttctggtatctggatgaatgttgttactgtt
ggtgaattaagtcattgtgctttagggttttatggtggccattggagcccaaatggagat
tccattttagcacatggatatggtggatccttccacctctggaaaaatgttggggtgaac
ctagataattggcaaccgcaaaaggttccgtctggacattttgcagctgtggcagatgta
gcgtgggcaagatctggtgaatacatactgtcagtcagccatgaccagacatctcgaata
tttgcttcatggaaaaatgaggcttctagtgatggggactcttggcatgaaattgctcgc
cctcaggttcatggtcatgatattaattgtgtgaccattatcagaggaaaggggaaccat
cgttttgtcagtggagctgatgagaaagttgccagagtatttgaagctccattttctttt
ttgaagaccttgaaccatgctacttcacaaagttctagtttctctgaagatatccaggta
gatgttcagattttgggtgcaaatatgtctgctcttgggctatcacaaaaacctatttat
cttcaggccacacatgagaccccatatagaagtgggaatgatggtcttgactcccttgaa
actattcccgatgcggttccagctgtgttgaccgaacccccaattgaggatcaactggca
tggcatacactctggccagaatcacacaaactttatggtcatggaaatgagttgttttct
ttgtgctgtgaccatgaggggaaacttgttgcttcgtcatgcaaggcccaatccgcaatg
gtagcagaaatatggttgtggcaagtgggttcatggaaggctgttggtcatatgcagtca
cacagtttaactgtgacacagatggaattctcacatgacgacaacatgcttttggctgtg
tcaagggatcgccagttttctgttttcactatcaaaagaacaggcaacaacgaagttagt
tatcaacttgtagcaaggcaggaggcacacaaaagaatcatctggtcgtgctcatggaat
ccacatggtcacgaatttgctacgggttcacgggacaagacagtgaagatttgggcggtt
gataagggatcttctgttaggcagcttctaactttgccgcaattcaatagtagtgtcaca
gcattatcttggtttggttttggtcgccagggaaacgatgggttcctagcagttggaatg
gaaagtggactgattgaactgtggagtctctctgtcaaaagaaccgatgatggtagcatt
gcagcagcaggtgtagctactgcttctgttgtgcaactcgatccgttcatgtgccatgtc
tctgcagtaaatcgtctagcatggaaaaatactaagagggaagattccaggagcatgcag
cttgcttcttgtggtgctgatcattctgttagagtgtttgagataaatgttgtttaa
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integrated database retrieval system