KEGG   Carya illinoinensis (pecan): 122308897
Entry
122308897         CDS       T08745                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cill03016]
    122308897
Transfer RNA biogenesis [BR:cill03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    122308897
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N WD40_Gbeta NBCH_WD40 Beta-prop_HPS5 TFIIIC_delta Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 122308897
NCBI-ProteinID: XP_042978108
LinkDB
Position
5:45734027..45743407
AA seq 838 aa
MSMNGGVEVKRLFIGAGCNRIVNNVSWGACDLVAFGAQNAVAIFCPKTAQILTTLPGHKA
SVNCTQWLPSNKFSFKAKQLERHYLLSGDADGVIILWELCLLDRKWRYVLQVPQSHKKGV
TCITGIMVSETEAIFASTSSDCTIHVWEVLFPSTTGGDCKLLCLESLFVGLKPMVALSLA
ELPGNTGHLVLAMGGLDNKIHLYCGERTGKFLHACELKGHTDWIRSLDFSLPICTKDEAK
SILLVSSSQDKGIRIWKLALRSSLGSTQGAYRSEEISLASYIEGPMFVAGPSSYQISLES
LLIGHEDWVYSVEWQPPLTASVEGIDYHQPQSILSASMDKTMMVWQPERTSGIWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGVNLDNWQPQKVPSGHFAAVADV
AWARSGEYILSVSHDQTSRIFASWKNEASSDGDSWHEIARPQVHGHDINCVTIIRGKGNH
RFVSGADEKVARVFEAPFSFLKTLNHATSQSSSFSEDIQVDVQILGANMSALGLSQKPIY
LQATHETPYRSGNDGLDSLETIPDAVPAVLTEPPIEDQLAWHTLWPESHKLYGHGNELFS
LCCDHEGKLVASSCKAQSAMVAEIWLWQVGSWKAVGHMQSHSLTVTQMEFSHDDNMLLAV
SRDRQFSVFTIKRTGNNEVSYQLVARQEAHKRIIWSCSWNPHGHEFATGSRDKTVKIWAV
DKGSSVRQLLTLPQFNSSVTALSWFGFGRQGNDGFLAVGMESGLIELWSLSVKRTDDGSI
AAAGVATASVVQLDPFMCHVSAVNRLAWKNTKREDSRSMQLASCGADHSVRVFEINVV
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgtcaatgaatgggggggttgaggtgaagagattgttcatcggagcaggatgcaacaga
atagtgaacaacgtgtcgtggggcgcctgtgatttggtggcctttggtgcccaaaatgct
gtagctatattctgccccaagactgctcaaatcttgaccacgcttccgggtcacaaggcc
tctgtaaactgcactcagtggcttccaagtaataaattttcatttaaagctaaacagtta
gagaggcactatctgctctctggggatgctgatggtgtcattatcttatgggaactatgt
ctccttgacagaaagtggaggtatgtgttacaagtaccacaatcacacaagaagggcgtc
acatgcattactggaattatggtttctgaaaccgaggcaatctttgcctctacttcgtca
gactgtacgatccatgtatgggaagtgttgtttccatctactactggaggtgactgcaaa
ttgctttgtctggaatctctctttgttggtttgaaaccaatggtagcactttcattagca
gaattgcctggaaatactgggcatttagttctagcaatgggaggattagataacaagatt
catctatactgtggggagaggactggaaagtttcttcatgcttgtgaattaaaagggcac
acggattggatccgaagtctggacttctcattacctatatgcaccaaggatgaagcaaaa
agtattctactagtaagttcgtctcaggacaaaggcatacgcatatggaaactggctcta
cggagttctcttggcagcactcagggtgcatacaggagcgaagaaataagcctagcatct
tatattgaaggccctatgtttgtagctggcccatcctcgtatcaaatatctttagaatct
cttctaattggacatgaagattgggtatattcagtggagtggcaaccccctttaactgca
tctgtagaaggaattgactaccatcaacctcaaagtatcttatctgcatctatggacaag
acaatgatggtctggcaacctgaaaggacttctggtatctggatgaatgttgttactgtt
ggtgaattaagtcattgtgctttagggttttatggtggccattggagcccaaatggagat
tccattttagcacatggatatggtggatccttccacctctggaaaaatgttggggtgaac
ctagataattggcaaccgcaaaaggttccgtctggacattttgcagctgtggcagatgta
gcgtgggcaagatctggtgaatacatactgtcagtcagccatgaccagacatctcgaata
tttgcttcatggaaaaatgaggcttctagtgatggggactcttggcatgaaattgctcgc
cctcaggttcatggtcatgatattaattgtgtgaccattatcagaggaaaggggaaccat
cgttttgtcagtggagctgatgagaaagttgccagagtatttgaagctccattttctttt
ttgaagaccttgaaccatgctacttcacaaagttctagtttctctgaagatatccaggta
gatgttcagattttgggtgcaaatatgtctgctcttgggctatcacaaaaacctatttat
cttcaggccacacatgagaccccatatagaagtgggaatgatggtcttgactcccttgaa
actattcccgatgcggttccagctgtgttgaccgaacccccaattgaggatcaactggca
tggcatacactctggccagaatcacacaaactttatggtcatggaaatgagttgttttct
ttgtgctgtgaccatgaggggaaacttgttgcttcgtcatgcaaggcccaatccgcaatg
gtagcagaaatatggttgtggcaagtgggttcatggaaggctgttggtcatatgcagtca
cacagtttaactgtgacacagatggaattctcacatgacgacaacatgcttttggctgtg
tcaagggatcgccagttttctgttttcactatcaaaagaacaggcaacaacgaagttagt
tatcaacttgtagcaaggcaggaggcacacaaaagaatcatctggtcgtgctcatggaat
ccacatggtcacgaatttgctacgggttcacgggacaagacagtgaagatttgggcggtt
gataagggatcttctgttaggcagcttctaactttgccgcaattcaatagtagtgtcaca
gcattatcttggtttggttttggtcgccagggaaacgatgggttcctagcagttggaatg
gaaagtggactgattgaactgtggagtctctctgtcaaaagaaccgatgatggtagcatt
gcagcagcaggtgtagctactgcttctgttgtgcaactcgatccgttcatgtgccatgtc
tctgcagtaaatcgtctagcatggaaaaatactaagagggaagattccaggagcatgcag
cttgcttcttgtggtgctgatcattctgttagagtgtttgagataaatgttgtttaa

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