Carya illinoinensis (pecan): 122308938
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Entry
122308938 CDS
T08745
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122308938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122308938
Membrane trafficking [BR:
cill04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122308938
Protein recycling
Other Rab GTPase associated proteins
122308938
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
CitX
Motif
Other DBs
NCBI-GeneID:
122308938
NCBI-ProteinID:
XP_042978151
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All DBs
Position
5
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AA seq
473 aa
AA seq
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MENADVFLGLQDFLDRMKQPSAADLVKSIKSFIVSFSNNVPDPEKDSAAIQEFFTKMEAA
FRAHPLWAGCSEEELDSSGEGLEKYVMTKLFPRVFASHPNDVQFDDRLSEKIALIQQFIQ
PENLDIKPTYQNETSWLLAQKELHKINMYKAPRDKLVCILNCCKVISNLLLNASIASNEN
PPGADEFLPVLIYVTIKANPPKLHSNLSYIQRYRHQSRLVAEPAYFFTNMLSAESFISNI
DAKALSMEETEFEKNMEYARALLSGLSADLDGQTDQSDKDGWSRAEPVEPRHQSLNVSNE
RDSITRAKSSETKSQSNMVPDAKDTSLMKKIPFLSDLENKGATMLLKEDVVSQVFRDYPY
LFAHGGDLTVNDVEELLNNYKQLVFKYVCLSKGLGVAPLPLSISQTQKPQEEATFKEAGD
PRTEESNDESKELLSQDDGTNKVSPLQDDILKPKLPQDETVATIGGGNDETSQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagacgtgttcttgggtctccaagactttctggaccgcatgaaacaaccc
tctgctgctgatttggtcaaatccatcaaaagttttattgtctcgttttcaaacaatgtt
cctgatccagagaaggacagtgctgcaatacaggagttctttaccaagatggaagcagct
ttcagagctcatccactttgggctggttgctcagaggaggaactggacagttctggtgaa
ggactagagaagtatgtcatgacgaagttatttccccgtgtatttgcttcgcatccaaat
gacgtacaatttgatgacagactttctgagaagatcgctttgattcaacaattcattcaa
ccagaaaacttggatattaaaccaacctatcaaaatgaaacatcatggcttctagcacag
aaagaactgcataagattaatatgtacaaggcaccaagagacaagcttgtttgtatcctt
aattgttgcaaggttatcagcaacttattgcttaatgcttctatagcttcaaatgaaaac
cctccaggagctgacgagtttcttcctgtcctgatttatgttactataaaggcaaaccct
ccgaaactgcactcaaacctgtcgtatattcaaaggtaccggcatcaatctcgattagtt
gcagaacctgcatattttttcacgaacatgctctcggctgagtctttcatctccaatatt
gacgcaaaggcactttcaatggaagaaactgagtttgaaaagaacatggaatatgctcga
gcacttctttctgggctttcagctgatttggatggtcagactgatcaaagtgataaggat
ggttggtctagagcagaacctgtggaacctaggcatcagtctttgaatgtttctaatgaa
agggactccataacacgagccaagtcgtctgaaacaaaatcccaaagtaatatggtcccg
gatgcaaaagatacatcattgatgaagaaaatccccttcctctcagatttggagaacaaa
ggagcaactatgcttttgaaggaggatgtggtgagccaagtctttcgggattatccttac
ttgtttgcgcatggtggtgacctaacagtcaacgacgtagaagagctgctaaataattac
aaacaacttgtcttcaagtatgtttgcctttccaaagggttgggtgttgctcctcttcct
ttgtccatttcacaaactcagaaaccgcaggaagaagctactttcaaagaagctggagat
ccccgtactgaagagtcaaatgatgagtcaaaagagcttcttagccaagatgatggtacg
aataaagtttcaccattacaagatgatattcttaaacccaagttgccgcaggatgaaaca
gtggcaactattggtgggggaaatgatgagacttctcaatga
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