Carya illinoinensis (pecan): 122308998
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Entry
122308998 CDS
T08745
Name
(RefSeq) SEC12-like protein 2 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122308998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122308998
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122308998
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
122308998
NCBI-ProteinID:
XP_042978251
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Position
5:complement(46737853..46744794)
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AA seq
407 aa
AA seq
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MGRSKGLDTPNFQKYGVPFYSAAWVPFKSIRFEHESQGQEEDRNQSSDQISRADGSSLAP
EPSADYNYIAFAGGGGEGRSGIPNAVVLARFDYTSNVLSNQPVAKLGTDSDLPYRMGVHP
GRDGLICSMPKSCRWFEWEVEKSEEVHKLGLKLSGKVLTQLEDVGQQLALVFNKEGSALA
AGGQDGNLRVFKWPSMEITLNEAGAHTTLKDLDFSPDGKYLVSLGNSGPARVWGVTSSTV
IASLPKENDEVFSSCKFSESSDKNQVLYIAAVTGKGGSIVTWNPATWKRMGSKSVARDTI
SAFNVSPDGKFLACGTIQGDILILNSTSMRVQTMVRKAHLGFVTALAFSHDSRALASVSL
DSSARVTLIEERKKTGIEMFKRNLEGRWENGGERIQISRKGERPVPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagcaagggcctggacactcccaacttccagaaatacggcgtcccgttctat
tcggccgcttgggttccttttaagagcataagattcgagcacgaatcccaaggccaggag
gaagaccgcaaccaatccagcgatcaaatttccagagccgacggatcttctctggctccg
gagccctccgccgattataactacatcgcgttcgccggtggtggcggcgagggtcggagt
ggaatcccgaacgccgttgttctcgcccgattcgactacacatctaacgttctctccaat
cagcctgtggctaagcttggaactgactctgatttgccttatagaatgggggttcatcct
ggtcgagatggcctcatttgttcaatgcctaagagttgcagatggtttgaatgggaagta
gaaaagagtgaggaagttcataaattgggtttgaagctgtctggtaaagtgcttacccag
ttggaagatgttggacagcaattagcattagtgtttaacaaggagggttctgcgcttgct
gctggtggccaggatggaaatttgagggtcttcaagtggcctagcatggaaattactctc
aatgaggctggcgctcataccactttgaaggacttagacttcagccctgatgggaaatat
cttgtctccttaggaaatagcggccctgctagggtttggggtgtgacttcctcaacagtc
atagcttcacttccaaaggaaaatgatgaggtttttagctcatgtaaattttctgagagt
agtgataagaatcaggtcctatatattgctgcagtgacaggtaaaggtgggagcatcgtg
acttggaatccagccacgtggaagaggatgggatccaagtctgttgctcgggacacaatt
tctgccttcaatgtttcaccagatggaaagttccttgcctgcgggacaattcaaggagac
attttgattttaaattcaaccagtatgcgggttcagacaatggttaggaaagctcacctt
ggctttgtaactgccctggcattctctcatgactcaagggctttggcttctgtatccctg
gactcaagtgcgagggtgacacttattgaggagaggaagaaaacgggaattgaaatgttc
aagagaaacctggaagggagatgggagaatggtggggaacgcattcagatatctaggaag
ggcgagagacctgtgccaaagtaa
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