KEGG   Carya illinoinensis (pecan): 122308998
Entry
122308998         CDS       T08745                                 
Name
(RefSeq) SEC12-like protein 2 isoform X1
  KO
K14003  prolactin regulatory element-binding protein
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122308998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122308998
Membrane trafficking [BR:cill04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122308998
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_HPS5
Other DBs
NCBI-GeneID: 122308998
NCBI-ProteinID: XP_042978251
LinkDB
Position
5:complement(46737853..46744794)
AA seq 407 aa
MGRSKGLDTPNFQKYGVPFYSAAWVPFKSIRFEHESQGQEEDRNQSSDQISRADGSSLAP
EPSADYNYIAFAGGGGEGRSGIPNAVVLARFDYTSNVLSNQPVAKLGTDSDLPYRMGVHP
GRDGLICSMPKSCRWFEWEVEKSEEVHKLGLKLSGKVLTQLEDVGQQLALVFNKEGSALA
AGGQDGNLRVFKWPSMEITLNEAGAHTTLKDLDFSPDGKYLVSLGNSGPARVWGVTSSTV
IASLPKENDEVFSSCKFSESSDKNQVLYIAAVTGKGGSIVTWNPATWKRMGSKSVARDTI
SAFNVSPDGKFLACGTIQGDILILNSTSMRVQTMVRKAHLGFVTALAFSHDSRALASVSL
DSSARVTLIEERKKTGIEMFKRNLEGRWENGGERIQISRKGERPVPK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggggaggagcaagggcctggacactcccaacttccagaaatacggcgtcccgttctat
tcggccgcttgggttccttttaagagcataagattcgagcacgaatcccaaggccaggag
gaagaccgcaaccaatccagcgatcaaatttccagagccgacggatcttctctggctccg
gagccctccgccgattataactacatcgcgttcgccggtggtggcggcgagggtcggagt
ggaatcccgaacgccgttgttctcgcccgattcgactacacatctaacgttctctccaat
cagcctgtggctaagcttggaactgactctgatttgccttatagaatgggggttcatcct
ggtcgagatggcctcatttgttcaatgcctaagagttgcagatggtttgaatgggaagta
gaaaagagtgaggaagttcataaattgggtttgaagctgtctggtaaagtgcttacccag
ttggaagatgttggacagcaattagcattagtgtttaacaaggagggttctgcgcttgct
gctggtggccaggatggaaatttgagggtcttcaagtggcctagcatggaaattactctc
aatgaggctggcgctcataccactttgaaggacttagacttcagccctgatgggaaatat
cttgtctccttaggaaatagcggccctgctagggtttggggtgtgacttcctcaacagtc
atagcttcacttccaaaggaaaatgatgaggtttttagctcatgtaaattttctgagagt
agtgataagaatcaggtcctatatattgctgcagtgacaggtaaaggtgggagcatcgtg
acttggaatccagccacgtggaagaggatgggatccaagtctgttgctcgggacacaatt
tctgccttcaatgtttcaccagatggaaagttccttgcctgcgggacaattcaaggagac
attttgattttaaattcaaccagtatgcgggttcagacaatggttaggaaagctcacctt
ggctttgtaactgccctggcattctctcatgactcaagggctttggcttctgtatccctg
gactcaagtgcgagggtgacacttattgaggagaggaagaaaacgggaattgaaatgttc
aagagaaacctggaagggagatgggagaatggtggggaacgcattcagatatctaggaag
ggcgagagacctgtgccaaagtaa

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