KEGG   Carya illinoinensis (pecan): 122309039
Entry
122309039         CDS       T08745                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa49-like
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122309039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122309039
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     122309039
SSDB
Motif
Pfam: RNA_pol_I_A49 Peptidase_S21
Other DBs
NCBI-GeneID: 122309039
NCBI-ProteinID: XP_042978322
LinkDB
Position
5:32366820..32372317
AA seq 436 aa
MNSDPEDAKFQLTANNDSPKRKKKKKHRAQPELPPPSPTVQAQVQVIHEDPQKASPFVGY
FPSGYDPSKSCGGSNSLVTESPSVSVYRSQKWPKRYQLVVSPTGSNVDFVGTNYSGEATA
GQQCRYALGVFDKGTQSLKIAPVACGKIFRLEPKVRGLDVADEEPESRVKEELSAQQRVY
KMRELTNLYGTKKSIKEAKKKHALNQEDDPKSQEELDGKIKEVKINKEALESTDAHIARN
IPPYDSSATSPQEAYPLDKIILKGEWGFLEDIFELLQVGAEVATNTYPTFVCNRIYKLQE
IQDEVEKRTLSCIFSYLTHLIKFKDQHSMDGVSSAKGHKIPSILFQKFSTMFSPASKRLS
AEKNDLLISYVLVLTLYADEFRTNPSDIAKDLRTSSIKLRVHYEHLGCKLSRQNNLILFT
LPLPLQFPTVRQKRRR
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgaactcagacccagaggacgctaaatttcagctaaccgcaaacaatgacagccctaaa
aggaaaaagaaaaagaagcatcgcgcgcaaccagaattgccaccgccgtcgccaacagtc
caagcccaagttcaagtcatccatgaagacccacaaaaggcctcaccttttgttggctac
tttccctccggttacgaccccagcaaaagttgcggcgggagcaattctctggtaactgag
tcgcctagtgtttcggtttatcggagccagaagtggcccaagagataccagctcgtggtg
agcccaactgggtccaatgtggatttcgttgggaccaactattctggcgaggccacggct
ggccagcagtgtaggtacgcactcggggtgtttgacaaggggactcagagcttgaagatt
gcccctgttgcttgtggcaagatatttaggttagaacctaaagttagagggttagacgtt
gctgatgaggaacctgaaagcagagtgaaggaagagctttctgcacaacaaagggtatac
aaaatgagagagcttactaatctttatggaacaaagaagtcaataaaagaggcaaaaaag
aagcacgcattgaaccaagaagatgatcccaagtcccaagaggagctagatgggaaaatc
aaagaagtaaaaataaacaaggaggctcttgaaagtaccgatgcccatattgcccgcaat
attcccccgtatgattcttctgccacttcaccccaggaggcttatccactagacaagatc
atccttaagggagaatggggtttccttgaagatatttttgaacttttgcaagtaggagca
gaagtagctaccaatacttacccaacctttgtctgcaatagaatttataaattacaggag
attcaggatgaggtagagaagagaacactttcttgcatattctcgtacttgactcatcta
attaagttcaaagatcagcattccatggatggtgtttcctcggcaaagggccacaaaatt
cctagtattctgttccagaagttctcaaccatgttctctccagcgtcaaaaaggctgtca
gctgagaaaaatgatcttctcatcagttatgtcttggtactcactctatatgcagatgaa
tttcgaaccaacccatctgatatagctaaggatctaagaacgagttccataaaattgagg
gtgcattatgagcatttgggttgcaagctctcacgccagaacaacttgattttgtttacc
cttcctttgcctctccaatttccaacggttaggcaaaagcggcgacgataa

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