KEGG   Carya illinoinensis (pecan): 122309129
Entry
122309129         CDS       T08745                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03020  RNA polymerase
cill03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122309129
  09124 Replication and repair
   03420 Nucleotide excision repair
    122309129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122309129
   03400 DNA repair and recombination proteins [BR:cill03400]
    122309129
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122309129
  RNA polymerase III system
   RNA polymerase III
     122309129
  RNA polymerase I system
   RNA polymerase I
     122309129
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122309129
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 122309129
NCBI-ProteinID: XP_042978426
LinkDB
Position
5:33388593..33391054
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQSDYSEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLEKNENS
NT seq 216 nt   +upstreamnt  +downstreamnt
atgatcatcccagttcgttgctttacctgcggaaaggtgattggtaacaaatgggacaca
tatcttgaccttctccagtcggattactccgaaggagatgctctcgatgccttggggttg
gtccgttattgctgtaggcgaatgcttatgactcatgttgacctcattgagaagcttctg
aattacaatactttggagaagaacgaaaacagttga

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