Carya illinoinensis (pecan): 122309210
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Entry
122309210 CDS
T08745
Name
(RefSeq) ion channel DMI1 isoform X1
KO
K21866
ion channel POLLUX/CASTOR
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122309210
Transporters [BR:
cill02000
]
Other transporters
Pores ion channels [TC:
1
]
122309210
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Gene cluster
GFIT
Motif
Pfam:
Castor_Poll_mid
TrkA_C
Bac_export_2
Motif
Other DBs
NCBI-GeneID:
122309210
NCBI-ProteinID:
XP_042978530
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Position
5:859260..868769
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AA seq
942 aa
AA seq
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MPETNEDPTPDPSPRKFERPPLLKKFKTIAEHEEPTPHFPGRLFPAVRRISTLPNSRSPR
RPSDLRVSVSNGDDPSSRHDNRLSDRDWIYPPFLGAYPARGRAVPVKPNSTRSRKLERSD
SSPPGRSMDVRLADETRRIPAPVNKSNDSDDKDSDAKKPLVVPSNQASVSPLGVCRTRGF
KQSFILYLLSFTCVISVPYAVYLQNRVEKLREENGNLYRLCGVKEVRGGSLKDLPFEHNS
PFSYFSCAAGRTVALYTVVVTLIMPFLLYKYLDYLPQIKSLSKRTKMNKEEVPLKKRIAY
MVDVCFSVYPYAKLLALLFATIFLIGFGGLALYAVSESSFAEALWLSWTFVADSGNHADR
VGTGPRIVSVSISSGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHILILGWSDKL
GSLLKQLAIANKSVGGGVVVVLAERDKEEMEMDIAKLEFSLMGTSVICRSGSPLILADLK
KVSVSKARAIIVLASDENADQSDARALRVVLSLTGVKEGLRGHVVVEMSDLDNEPLVKLV
GGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPQLDGLRFGDALI
SFPDAIPCGIKMAADGGKIILNPDDSYVLKEGDEVLVIAEDDDTYAPGPLPEVCRGLFRK
IPDHPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKEREKKLTDGGLHIS
RLENIKLVHREGNAVIRRHLESLPLETFDSILILADESLEDSVVHSDSRSLATLLLIRDI
QSKRLPFKDKKSTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYV
LSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELRFYDIMIRGRQ
RHEIVIGYRLANAECAIINPSLKSEPRKWSLDDVFVVISWGE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaccaatgaagatccaactccggacccaagcccgagaaaatttgagaggcca
ccgctcctcaagaaattcaagacaatcgcagaacatgaggagcccactcctcacttcccc
ggccgactcttccccgccgtccgtcgcatctccacactccccaattctcgctcccctcgc
aggccgtccgatcttcgtgtctccgtcagcaacggtgatgatccctcctctcgacacgac
aatcgtctctccgatcgcgactggatctaccctccctttcttggcgcgtatcccgcgaga
ggcagagcggttccggtcaagcctaactccaccaggtcgcggaagctcgagcggtcggat
tctagccctcctggccgttcgatggatgtgagattggcggatgagacgcgccgtattccg
gctcctgttaataagagcaatgattctgatgataaggattcggatgctaagaagccgttg
gtggtgccgagtaatcaagcttcggtgagtccactcggtgtgtgcagaacccggggattt
aagcagtccttcatcctatatttgctcagtttcacttgtgtaatatctgtaccttatgca
gtttatttacagaacagagtcgaaaaacttcgggaagagaatggcaacctttatagactt
tgtggtgttaaagaggttcgtggtggcagcttgaaggatttgccatttgaacataatagc
ccattctcttattttagttgtgctgctggtagaactgttgccttgtacactgtggtggtc
acactcattatgccatttctgctatacaaatatcttgactatcttcctcaaatcaaaagt
ctttcgaagaggactaagatgaacaaggaagaggttcccttgaagaagagaattgcatac
atggtggatgtatgtttctctgtatatccttatgcaaagctgcttgcactcctatttgca
actatatttcttatagggtttggtggattggcattatatgcagtcagtgagagtagcttt
gccgaggctctttggctttcctggactttcgtagctgactcaggaaatcatgctgacagg
gttggcactgggccaaggattgtttctgtctctataagttcaggaggcatgctgatattt
gccatgatgcttgggcttgtttcagatgctatctcagagaaggtggattcactgcgaaaa
gggaagagtgaagtcatcgaaaggaaccacatacttattcttggatggagtgataaattg
ggttcactcctgaagcaactagcaatagcaaacaaaagcgttggtggtggtgttgttgtc
gtacttgcagaacgagacaaggaggaaatggagatggatattgcaaagctagaattcagc
ttgatggggacatctgttatatgcagaagtggcagtcctcttatactggctgacttaaag
aaggtgtcagtttcaaaggcacgtgctatcattgtattagcttcagatgaaaatgctgat
cagagtgatgcacgtgctttgagggttgtgctcagtctcactggagtgaaagagggtttg
aggggtcatgttgttgtggaaatgagtgaccttgacaatgagcccctggtgaagctggtt
ggtggggaacttattgaaacagtagttgctcatgatgtaattggacgcctgatgatacaa
tgcgctctgcaacctggccttgcacagatttgggaggatatattggggtttgagaatgct
gagttttatatcaaaaggtggccccagttggatggtctgcgttttggagatgcacttatt
tcatttcctgatgcaattccttgtggaattaagatggctgcagatggtgggaagataatt
ttaaatccagatgacagttatgttttgaaagaaggggatgaagtccttgttatagctgag
gatgatgacacatacgccccaggtccccttccagaggtatgtaggggtctttttcgaaaa
atacctgaccatccaaaatatcctgagaagatactgttttgtggttggcgccgtgacatt
gatgatatgattatggttctagaggcatttttagctccaggttcagaactgtggatgttt
aatgaggttccagaaaaagaaagagaaaagaagctcactgatggtggacttcatatatct
aggttagagaacataaaacttgtgcaccgtgaggggaatgctgttattcgacggcattta
gagagtcttcccttggagacttttgattccatattaattcttgcagatgagtcgctggaa
gactctgttgtgcattctgactcacgatcccttgccacccttcttctgatccgagatata
cagtcaaaacgtctgccattcaaagataaaaaatcaacttctttacggttatctgggttc
tcccacagctcttggatccgtgaaatgcagcaagcttcagacaaatcaataataattagt
gaaatcctggattctagaacaagaaacctggtgtccgtgtccagaattagtgactatgtg
ctatcaaatgaattggttagtatggcactagcaatggtagctgaagacaagcaaataaat
cgtgttcttgaggagctatttgcggaggaggggaatgagatgtgtatcaagcctgcagaa
ttctatttatttgaccaggaggagctccgcttttatgatataatgattaggggtcgtcaa
aggcacgaaattgtgattggctatcgactcgcaaatgcagagtgcgctataattaaccct
tccctgaaatcagaaccaagaaaatggtcacttgacgatgtttttgttgttatttcatgg
ggtgaatga
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