Carya illinoinensis (pecan): 122309337
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Entry
122309337 CDS
T08745
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122309337
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122309337
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
DUF948
CENP-F_leu_zip
NleF_casp_inhib
SYCE1
HAP1_N
FAM120A
PUMA_CC
TP_0481_C
bZIP_1
Motif
Other DBs
NCBI-GeneID:
122309337
NCBI-ProteinID:
XP_042978738
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Position
5
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AA seq
94 aa
AA seq
DB search
MSSRRSRSRQQSGVSSNITDEQITDLVSKLQQLIPEIRNRRSNKVSASKVLQETCNYIRS
LHREVDDLSDRLSDLLATTDTDSAQAAIIRSLLM
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagaagatcccgttccaggcagcagtcaggtgtttcaagtaatatcactgat
gagcagatcaccgatcttgtttctaagttacaacaactcatccctgagatccgcaatagg
cgctccaacaaggtctcggcttccaaggtcttgcaggagacttgcaactatattcgaagc
ttacacagagaggtggacgaccttagcgaccgcttgtccgaccttttggcaacaacagac
actgatagcgctcaagcggccattatcaggagtttacttatgtaa
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