Carya illinoinensis (pecan): 122309345
Help
Entry
122309345 CDS
T08745
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122309345
Transcription factors [BR:
cill03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122309345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122309345
NCBI-ProteinID:
XP_042978753
LinkDB
All DBs
Position
5:26830745..26835104
Genome browser
AA seq
607 aa
AA seq
DB search
MAASSSSAPFFGIREEDQNQMKQQHSSTPASSTAPAAPPQKKKRNQPGTPYPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVH
HDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQETARNPPSLSPTMGSHLYGSSNMGIGLSQVGPQISSIQDQN
NSQSSDILRLVGARPGQFDHLLPPGVGSSFRSPQPPLPSSAFFMQPDSNQNYHQDQHQSS
QGFLPNKSFHGLMQFSNFQNSTTSTSPTASNLFNLNFLSNSSTTNSNSNANNNNNNNNNS
SSHPSSGLLIPDHFENQDGTGVGGEGSNIFSGNVMADQITSGVPSLYGSSVRSNKNAMPP
MSATALLQKAAQMGSTSSKNSASLLRTFGSSSSGGNKSDNKPLAPGSLSSMFGENENHLQ
DLMNSFASGNSSIFGSGSGGLGTFGGYDANRTNVERMDEPKLHQNPTMSVGGSDRLTRDF
LGVGQIVRSMSGVSQREQQQQQQQQHQRQHQHQQQQQQHGMDVMSSLESDRNTAPSSQSF
GGGGNFQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttcctcggcacccttctttggaattagagaagaggatcagaaccag
atgaaacaacagcattcctctactccagcttcatctacagctccagccgcaccaccccag
aagaaaaagagaaatcaaccaggaacaccatatccagatgcggaggtaatcgcactatct
cccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttccaa
agggagcaaaatctacagctccacagaagaggacacaacctgccttggaagctaaagcag
aagactacaaaagaaccaaaacgaaaggtttatctgtgtcccgagcccacatgcgtacac
cacgacccttcgagggctctcggcgacctcacaggcatcaaaaagcattactctagaaag
catggcgagaagaaatggaagtgcgagaagtgctccaagagatatgctgtgcagtccgat
tggaaggctcattcgaagacctgcggcactagagaatacagatgcgactgtggcactctc
ttctctaggcgggacagctttatcactcacagggctttctgtgatgcattggctcaagaa
actgctaggaaccctcccagtttgagccctacaatgggcagccatttgtacggaagcagc
aacatgggtatagggttatctcaagtgggtcctcaaatttcctcaatacaagaccagaac
aacagccaatccagtgatatacttcgactcgttggtgccaggccaggtcaattcgatcat
ctccttccccctggggttggttcgtctttccgatcaccacagccgcccttgccttcttct
gctttctttatgcagccggattcgaaccagaactatcatcaagatcaacaccaatcttca
caagggtttttgccaaacaagtcgttccatggattaatgcagttctctaattttcaaaac
agcacaaccagcacctctccaactgcaagcaatctctttaacctcaacttcctttccaat
agcagtactacaaatagcaacagcaatgccaacaataataacaacaataacaacaacagt
agcagtcatccgtcttctggtttgctaattcctgatcatttcgagaatcaagatggcact
ggtgttggaggtgaaggatccaatatcttttcaggtaacgtaatggctgatcaaatcacc
tcgggcgtcccttctctttatggctcatcggttcgaagcaacaaaaatgccatgccacct
atgtctgcaactgcactgctccaaaaggctgcacaaatgggttcaacatcaagcaagaat
agtgcctcattgctaagaaccttcggaagctcttcctcaggtggcaacaaatctgataat
aagccgcttgctcccggcagcttaagcagcatgtttggtgaaaatgagaatcacctacaa
gatttaatgaactcctttgccagtggaaactcctccatttttggaagtgggtctggaggg
ctcggtacatttggtgggtacgatgcaaacaggaccaatgtagaacgcatggacgaaccg
aaactgcaccaaaatcccacaatgagtgttggagggtcagataggttaaccagggatttt
cttggggtaggacagatagtgagaagcatgagcggagtttcacagagagaacagcagcag
caacaacaacaacaacaccaacgccagcaccagcaccagcaacagcaacaacaacatggc
atggacgtcatgagttccttggagtcagacagaaatactgcgccgtcaagccaatctttc
ggaggtggagggaattttcagtga
DBGET
integrated database retrieval system
