Carya illinoinensis (pecan): 122309410
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Entry
122309410 CDS
T08745
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122309410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122309410
03036 Chromosome and associated proteins [BR:
cill03036
]
122309410
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122309410
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122309410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
Motif
Other DBs
NCBI-GeneID:
122309410
NCBI-ProteinID:
XP_042978826
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All DBs
Position
5:42139560..42150401
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AA seq
188 aa
AA seq
DB search
MAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIEKKAAYLQELQEQFIGLQNL
IQRNEQLYSSGNAPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDANY
VLKAMKICERPQVDDMVHNFSADGGERSSLSGVHQPQIPLPSVSNTSVRPPTSPPLPGIL
KARVKHEH
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatatcatttctaaggacaaaaaagagatacaatggaaaggtctgcctcgt
actagcctgaacgatattgaagaattgaagacagagcgtctgggactcagaaacagaatt
gaaaagaaagccgcatatttgcaagaactgcaggaacaattcataggtcttcagaacctg
atacagcgaaatgagcaattgtacagctctgggaatgctccaagtggaggtgtggcttta
ccttttattcttgttcagacacgacctcatgcaaccgtcgaggtggaaatatcagaggat
atgcagctggtgcatttcgacttcaacagcaccccatttgagctccatgatgccaactat
gttctaaaggcaatgaaaatttgtgaaagaccacaggttgatgatatggtgcacaatttc
tctgcagatggtggcgaacgttctagcttgtcaggtgtgcatcaaccacagattcctctt
ccttcagtgtcaaacacttcagttaggcctcccacctcgccaccacttcctggaattcta
aaagcacgcgtgaagcatgagcattag
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