Carya illinoinensis (pecan): 122309462
Help
Entry
122309462 CDS
T08745
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
122309462
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
122309462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
Cep57_MT_bd
DUF6240
Motif
Other DBs
NCBI-GeneID:
122309462
NCBI-ProteinID:
XP_042978892
LinkDB
All DBs
Position
5:35360498..35363397
Genome browser
AA seq
478 aa
AA seq
DB search
MSLLPVSGIPSQTQNPSISVVKRLLATFHPSIWGDHFISYNSKSMEISSESLEKVQRLKE
KVQSLLMAPVDDISQKLELIDAIQRLGVSYHFESEIDTILQQIHNNGDDTGDSDDLYTVS
LRFRLLRQQGYNTPSDVFSKFKDSEGNFEESIIHDVRGILSLYEASHMRVRGEDILDEAL
HFTTTQLESMVSNLNPSVAAQVRRALERPLRKWMPRLEARHYFSTYPETASFNEVVLNFA
KLDFNIIQRLHQKEVSELSRRWKEDLGVPEKISYVRDRVVELYFMWILGPYFEPQYSHGR
MMLGKVASVVSIMDDTYDAYGTFEELKLFTDAIIRWDNCCIEQLPEYMKSTYQALLDITK
EIEEEMSKEGRIYGLYYTKEAIKRLAQAYLLEAKWMKEKYIPTVEEYMSNALVTGGYSTL
VTLSFLGMGDATKEVFDWACGNPKIVKAAETICRLMDDLFLLSLSKREDTLSLPSTAI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcttccagtttcagggattccttcccaaacccagaatccaagtatttctgtt
gtaaaacgcctgttggcaacttttcacccaagcatttggggagatcatttcatctcttat
aatagcaagtccatggagatttcctctgagagcttggagaaagttcaaaggctgaaagaa
aaagtgcagagcttgctgatggctcccgtcgatgatatatcacaaaagttggagctgatt
gatgcgatccaacgcttaggcgtgtcttaccattttgaaagtgagattgataccatactc
caacaaattcacaacaatggtgacgacactggagactctgacgacctctacactgtttct
ctccgttttcgcttactgaggcagcagggttataacactccgagtgatgttttcagcaag
tttaaggacagtgaagggaacttcgaggaatcaattattcacgatgtgcgaggtatttta
agcctttatgaagcttcgcatatgagggtgcgtggagaagatatacttgatgaagcactt
cattttactacaacgcaactcgagtcgatggtgagtaatttaaacccttctgttgctgca
caagtgcgtcgtgccttagagcggccgcttcgaaaatggatgccaaggttagaggcgaga
cattatttttctacctacccagaaactgcttcatttaatgaagttgttctcaacttcgct
aagttggattttaacataatacaacggctacaccagaaggaagtttccgagctctcgagg
cggtggaaagaagatttaggggtcccggaaaagatatcgtatgtccgagatagagtggtg
gagttgtacttcatgtggattttgggaccgtactttgaaccccaatattctcatgggagg
atgatgcttggcaaagtggcctccgtggtctcaataatggatgatacatatgatgcctat
ggtacatttgaagagcttaaactctttacggatgcaattataaggtgggataactgctgc
atagagcaactcccagagtacatgaaatctacctatcaagcactcttggatattactaag
gaaattgaggaagagatgtccaaagaaggaaggatatacggcctttactatacaaaggaa
gcaatcaaaaggctagctcaagcctaccttcttgaagccaaatggatgaaggaaaaatat
atacccacggtggaggagtacatgagtaacgccctagtaaccggtggctactctacactt
gtaaccttatcttttcttggcatgggagatgcaacaaaggaggtcttcgattgggcctgc
ggtaaccctaagattgttaaagcagcagaaacgatatgcagactcatggatgacttgttt
ctactgagtttgagcaagagagaggacacgttgtctttgccctcgactgctatatga
DBGET
integrated database retrieval system