Carya illinoinensis (pecan): 122309499
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Entry
122309499 CDS
T08745
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
cill03013
Nucleocytoplasmic transport
cill03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122309499
03008 Ribosome biogenesis in eukaryotes
122309499
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122309499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122309499
03009 Ribosome biogenesis [BR:
cill03009
]
122309499
03016 Transfer RNA biogenesis [BR:
cill03016
]
122309499
03036 Chromosome and associated proteins [BR:
cill03036
]
122309499
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122309499
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122309499
Pre-60S particles
122309499
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122309499
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122309499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
122309499
NCBI-ProteinID:
XP_042978942
LinkDB
All DBs
Position
5:complement(45164503..45190499)
Genome browser
AA seq
1079 aa
AA seq
DB search
MAAEKLRDLSQPIDVALLDATVAAFYGTGSKEERTAADQILRDLQNNPDMWLQVMHVLQN
TKHLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRMERLYVNK
LNVILVQILKHEWPVRWRSFIPDLVAAAKTSETICENCMTILKLLSEEVFDFSRGEMTQQ
KIKDLKQSLNSEFQLIHELCLYVLSASQRAELIRATLSTLHAFLSWIPLGYIFESPLLET
LLKLFPVPSYRNLTLQCLTEVAALNFGDFYNVQYVKMNSIFMVQLQAILPPATNIPEAYA
HGSSEEQAFIQNLALFFTSFYKFHIRVLETTQENIAALLMGLEYLISISYVDDTEVFKVC
LDYWNSLVLELFEAEAHHNLDNPAVAAANVLGLQMPLLPGIVDGLGPQLLQRRQLYAGPM
SKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTE
KQMLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKG
KDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQ
KCKRKFVIVQVGENEPFVSELLSGLVTTIVDLEPHQIHTFYESVGHMIQAESDLQKREEY
LQRLMELPNQKWVEIIGQARQSVDFLKDQGVIRTVLNILQTNTSVATSLGTHFLSQISLI
FLDMLNVYRMYSELISSSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIG
KQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEM
ITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETG
LNLLLEMLKNFQNSEFCNQFYRTYFLSIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVE
SGALTEPLWDVATVPYQYPNNTMFIREYTIKLLSTSFPNMTASEVTQFVNGLFESRNELS
AFKDHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMLDT
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagcttagggacttgagccagccgatcgacgtggccttgctcgatgct
accgtggcggccttctatggcaccggatctaaggaagagaggacagcagcagaccaaatt
ttgcgggacttgcaaaataatccagatatgtggcttcaagttatgcacgtcctacagaat
acaaaacacctcaacaccaagttctttgccttgcaggttttagaaggtgttataaagtat
cggtggaatgcattgcctgttgaacagcgagatggaatgaaaaactacatatctgaagtt
attgttcagctctcaagtaatgaggcttcttttcgaatggaaaggctgtatgtcaacaag
ctcaatgttatattggttcagatattgaagcatgaatggcctgtcagatggcgaagcttt
attcctgatcttgttgcagcggctaaaactagtgaaacaatttgtgagaattgcatgact
atattgaaacttctaagtgaagaggtttttgatttctcaaggggagaaatgactcaacag
aagataaaagatcttaaacagtcattgaacagtgaatttcaacttattcatgagttatgc
ttatatgtactatcagcatctcagagagctgagcttatacgcgctacattatccacattg
catgctttcctttcatggattcccttgggttatatttttgagtccccattgcttgagaca
ctcctaaaactttttccagtgccatcatatcggaatcttacccttcaatgtttaacagag
gtcgcagcccttaattttggggacttctacaatgtgcagtatgttaagatgaatagtata
tttatggtgcagttacaggccatccttccccctgcaacaaacatcccagaagcttatgca
catggatctagtgaggagcaggcatttattcagaacttggcactgttttttacctcattc
tataagtttcatatccgagtgctggaaaccactcaagagaatatagctgccttgctaatg
ggtcttgaatatcttattagcatctcatatgtggatgacacagaggtttttaaggtttgc
ttggactattggaattccttggttttagaactgtttgaggctgaggcacaccataatctt
gataatcctgcagttgcagctgcaaatgtgttgggactgcagatgccattgctccctggc
atagttgatggccttggtccacaacttctgcaaaggcggcaactatatgctggcccgatg
tcaaagttgagaatgctcatgatctgtcgaatggctaagcctgaagaggttctcatagtc
gaagatgaaaatgggaatattgttcgtgaaaccatgaaagacaatgatgttcttgttcaa
tataagatcatgagggagacacttatctatttgtcacatcttgaccatgaggacactgaa
aaacagatgttgaaaaaattaagtaaacaactgagtggagaggattggacatggaacaac
ttgaacacattatgctgggcaataggatctatatctggctccatgatggaagaacaggaa
aacagattcttggtgatggtgattcgtgatttactgaatttatgtgaaatcacaaaaggg
aaagataataaagctgttattgcaagtaacattatgtatgttgttggacagtatccaagg
tttttgagagcgcattggaaattcttgaaaactgttgtgaacaagttgtttgagttcatg
catgaaactcatccaggagttcaggatatggcctgtgacacattcttaaaaatcgttcag
aagtgcaagcgtaaattcgtgattgtacaggttggagagaatgaaccgtttgtatccgaa
cttctatcaggcctcgtaacaaccattgttgatcttgagccccaccagatccatacattt
tatgaatctgttggtcacatgatacaagcagaatcagatctccagaaacgggaagaatac
cttcagaggttgatggagctaccaaatcagaaatgggttgagattatagggcaggcccgc
caaagtgttgatttcctgaaggatcaaggtgtcatccggaccgtgcttaatattttgcag
acaaatacaagcgttgccacttcacttggaactcatttcttatctcaaatttctctgata
tttttggacatgcttaatgtgtacagaatgtacagtgagcttatatcaagtagcatagca
gaaggaggaccctttgcatctaaaacatcctacgtaaaactattgcggtcagttaaaagg
gagactcttaagcttattgaaacgttcttggacaaggctgaagatcaaccacagattgga
aagcaatttgtgcccccaatgatggatcctgttcttggtgactatgctaggaatttaccc
gatgctagagaatcagaagttctgtcactttttgccacaataataaataaatataaagct
gcaatgatagatgatgtacctcgcatatttgaggcagtttttcagtgcacattggagatg
attacaaaaaactttgaagattacccagagcatcgtctcaagtttttttctttacttaga
gcaattgctacacattgttttcctgcattgattcgtttatcaagtcagcaactaaagctt
gtcatggattccattatatgggcatttcggcacacagaaaggaatatagctgaaactggg
ctaaaccttttattggaaatgttgaaaaactttcagaattctgagttctgtaatcaattc
tacagaacatacttcctatcaattgagcaagaaatatttgctgtcttgacggacaccttt
cataagcctgggttcaagttgcatgtccttgtgcttcaacacttattttgcctggtggag
tctggtgcattgacggagcctttgtgggatgttgctacggttccttaccaatacccaaat
aacacaatgtttatccgtgagtacaccataaaactactgagcacatcattccctaacatg
actgcatcagaggtcactcaatttgtaaatgggctatttgaatcaagaaatgagctctct
gcttttaaggatcacataagagacttccttgtgcaatcaaaagaattttctgctcaggac
aataaagacctttatgcagaggaagccgctgctcagagagagagagagcgacaacggatg
ctttctattcctgggcttattgcccccaatgagatacaagatgagatgttggacacataa
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