Carya illinoinensis (pecan): 122309641
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Entry
122309641 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122309641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122309641
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122309641
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
122309641
NCBI-ProteinID:
XP_042979111
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Position
1:complement(9171828..9177702)
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AA seq
739 aa
AA seq
DB search
MDSRRNNFVRFRSWSSENSMNDGIYDREPRNDDQSGPRKMRVHDPQDQFLQRWNKLFVLS
CAISLALDPLFFYIPVLKLNDEETCLYTDRKLAIIICVLRSVTDAFYAIHIYLQFRTGII
IPSSRVFGKGQLISHPMTIAKRYLFTYFTVDVLAILPLPQVVVFVTSPSFKNALPMAMKE
MLKSVIFSQYVPRLLRIYPLYVEVIRHSGRLTKTAWGGAASNFFVYMLASHVIGAFWYFF
GIERQDACWQKMCRKINGCRDKDFYCGNKLDQADFVGVVSQACRIVEPDETKSSIDHFDY
GIFTGVLKSGVVESRNFSMKFSYCFWWGFRSLSSIGQNLETSTFFWEIVFVVCIAISGLV
FLLVLIGNMQIYLQSTTVRRVQELRVRKTDIEQWMSRCMLPNELRERVRQHEQHKWLQIR
GVEEENLIRSLPKDLRRDIKRHLCLNLLLRVPAFNEIDQQLWDPMLDRLKTGLYTKNTYL
IREGDPVDEMIFIMRGTLTTSTANGGTTDFFNTSDLKSGDFCGEELLDLLSSTALPISTR
TLVARTEVEAFILKAEDLRIMASQFPKLRSWESQHAFRFYSHQWRTWAACFIQSAWRRFC
KRKHERAALCDAENRLQYALANEAGTSESLGATKERVKDIGNTRVLQLLPSKLVEPNFNV
AGDNTAQERTTAVVTEPATTQTSMGHPPNVANIVRTEIFAALEEHRVGMERIIMLIMTRL
TDMEGHMAAIEEVLRTRSL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggattccaggcgaaataattttgtaaggtttcgaagttggagttcggagaattccatg
aacgatggcatatatgatcgtgagccacgaaatgatgatcagtcaggtcctaggaagatg
agagtccatgatccgcaggatcaatttcttcaaaggtggaacaaactatttgtgctttct
tgtgcgatatcattggcattggacccactattcttttacatcccagtgttgaagctgaat
gacgaggagacatgcttatatacggacagaaaactggcgattattatttgtgttcttcgt
tcagtcacagatgctttttatgcaattcatatatacttgcaatttcgaactgggattatc
ataccttcttcccgagtgtttggaaagggtcagttgattagtcatcctatgacaatagca
aaaagatacttgttcacatatttcactgtcgacgttctagctatccttccattaccacag
gtggtagtttttgttacctctccgtcattcaaaaatgcacttccaatggcgatgaaggaa
atgttgaagtccgtaatcttctcccaatatgtgccgaggcttttgcggatctatccacta
tatgtagaagtaattagacactctggcagactaactaagacggcatggggtggagctgct
tctaactttttcgtctacatgcttgccagtcatgtcattggagcgttttggtactttttt
ggcattgaacgacaggatgcgtgctggcagaaaatgtgtaggaaaattaatggttgtcga
gataaagatttttactgtggaaataaacttgaccaagctgactttgttggtgtagtaagt
caggcttgccgtattgtcgaaccagatgaaactaaaagctcaattgatcactttgactat
ggaatatttactggagttttgaagtctggggttgtggaatcaagaaacttttcaatgaaa
ttctcttattgcttctggtggggttttcgcagtctgagttctattggccaaaatctggaa
acaagcacctttttttgggagatagtctttgttgtttgcatagccatatctgggttggtc
tttttgttagtacttattggcaatatgcagatatatctgcaatctacaacagtgaggaga
gtacaagaactgagggtgaggaagactgatatagaacaatggatgtcccgatgtatgctc
cctaacgaattaagggagcgggttagacaacatgaacagcacaaatggcttcaaattaga
ggtgtggaggaagagaatctcatccgtagtcttcctaaggatcttagaagggacataaag
cgtcatctttgcttgaatcttcttctaagggttcccgcgttcaatgagatcgatcaacaa
ctgtgggatccgatgttggaccgtctcaagacagggctttacacaaagaacacctacctt
attcgtgaaggggatccggtagatgagatgatctttatcatgcgaggaactctaaccact
tctactgctaatggcggaacaactgattttttcaacactagtgatcttaaatctggtgac
ttttgtggtgaagagcttcttgatttgttgtcctcgaccgcattacctatttcaactaga
acattagtggctagaacagaggttgaagccttcattctaaaggcagaagacttgaggatt
atggcctctcagtttccgaaacttcgtagctgggagtcgcagcacgctttcaggttctac
tcccatcaatggaggacatgggcggcctgttttatccaatcagcttggcgccgtttctgt
aagagaaagcatgaacgggcggctttgtgtgatgcagaaaatagattgcaatatgctttg
gcaaatgaagctgggacctcagaaagtcttggtgcaactaaggaacgagtgaaagatata
ggcaataccagagtgctacaactgctgccatcgaagcttgttgagcccaatttcaacgtt
gcaggtgacaatactgcacaggaacggactactgcagttgttacggagcctgctactaca
cagacctcaatgggtcatcctcccaacgtggctaatattgtgcgcacggagatttttgca
gcacttgaagagcatcgtgtgggtatggagaggatcattatgctcatcatgactcgattg
acggacatggagggtcatatggctgctatagaggaggtcctccggactcgaagtctttag
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