Carya illinoinensis (pecan): 122309706
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Entry
122309706 CDS
T08745
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122309706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122309706
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
SR proteins
122309706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122309706
NCBI-ProteinID:
XP_042979215
LinkDB
All DBs
Position
5:3841352..3862241
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AA seq
265 aa
AA seq
DB search
MSHFGRTGPPDITDTYSLLVLNISFRTTADDLFPYFDKYGKVVDIFIPRNRRTGDSRGFA
FVRYKYADEAQKAVDRLDGWCHSVSPVCLSLNERKVVDGREITVQFAKYGPNAERIDKGR
IIEPSSRSRSRSPRRRYRDDYRDRGSRRRSRSRSFDRYDRDRYGRDRGYRRRSRSRSISP
DYHRARGRGHYDDELQIRSRSRSMDNASPDRRGRRSPSPRRSPSPQKSLSPRGKSSERRS
HDGRSPTSHSISPRGHPADSRSQSP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaagaacaggccctccggacattaccgacacttactcactccttgtc
ctcaacatttccttccgtacgactgcggatgatctattcccgtattttgataaatacggc
aaggtcgtggatatcttcatccctagaaatcgaaggactggtgactcaaggggctttgca
tttgtgcggtacaagtatgctgatgaggcacaaaaggcagtggataggcttgatggttgg
tgtcactctgtctcccccgtctgtctctctcttaatgaacgaaaagttgttgatggtcga
gagataacagttcaatttgctaagtatgggccaaacgcagagaggattgacaaagggagg
attatcgaaccgtcctcaaggtcaagaagtcgcagtcctcgtaggagataccgggatgac
tacagagatcggggttccaggagaagaagccgcagtcgaagttttgatagatacgatcgt
gataggtatgggagggataggggttatcgccgccgcagcaggagccgtagcattagtcct
gattaccatagggcccgaggaagaggtcattatgatgatgagcttcaaatccgaagccga
agccgatcaatggataatgcctcccctgatcggcgcggcaggcgtagccctagtcctcgc
agaagtccttccccacagaagtctttgtctcctaggggtaaaagttctgaaaggcgaagc
catgatggacggtccccaacttctcatagtatttcacccaggggccatcctgctgattct
cgaagccaatccccgtga
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