Carya illinoinensis (pecan): 122309707
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Entry
122309707 CDS
T08745
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122309707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122309707
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
122309707
Ubiquitin system [BR:
cill04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
122309707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
Motif
Other DBs
NCBI-GeneID:
122309707
NCBI-ProteinID:
XP_042979224
LinkDB
All DBs
Position
5:complement(9349455..9360230)
Genome browser
AA seq
1148 aa
AA seq
DB search
MENEEYDSVGMVNEPTTSRHDNNSPKQDYSTTSGLVCDPSVDSESKEVSKPMDTASNNHN
IPYIYRQDVVKRNNSGMTGIVTEVAGETDSDSSITDDEDDDGDDDDDDEDNGGENEEDGD
GNSNANVNSDWKRGGGKSDPLPADQVRVLWMDENESTVNVNDVAVVDRGFLHGDFVATAS
DPTGQVGVVVDVNISVDLLASDGSVMKDVSSKDLKRVRDFTVGDYVVLGPWLGRIDDVLD
NVTVLFDDGSVCKVPKAEPVRLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGL
WKANRLEGTVTKVTVGSVFIYWIASAGYGPDSSTAPAEEQSPKNLKLLSCFSHANWQLGD
WCLLPSLALPSSIPLDSDLSKLELHHSINSELDSTQLGSGCDSEEVSLEESNENSESMDL
DPVPAVDGNDRNFPINETESSSCGSSLSVSKEPVHESWPLHRKKIRKVVVRRDRKTRKKE
ESFERALLIVNTVTKVDVAWQDGKIGHWLDSTSLIPIDSPGDHEFVAEQYVVEKATDDGD
DVGEIRRVGIVKSVNAKERTACVRWLKPVTRAEDPREFDKEEIVSVYELEGHPDYDYCYG
DVVVRLSPVSVSAETATGIDSIDQAKQQNGPDEVKQDMKRHSGCKKVDDVSEYKACSGFS
DLSWVGNITGLSNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESMAAGSEISDDAASWET
VNDNEMDALENSQEEDGLHDAHYANSEPEESGENSGKNTALSVPLAALRFVTRLATGIFS
RGQKNIDPSCLDSKVESEVESQQIIQISEGKDSSNESSSQKSNIIDSFGTDVKEEFASEA
QKLLEAAEASGNLRTEESNAPACSGDDTCGFKHFDIAKDPMDHYFLGAYGQNNNGRKWYK
KVQQDWSILQNNLPDTIYVRVYEDRMDLLRAVIVGAYGTPYQDGLFFFDFHLPPEYPDVP
PSSYYHSGGWRINPNLYEEGKVCLSLLNTWTGKGNEVWDPKSSSILQVLVSLQGLVLNSK
PYFNEAGYDRQIGTPEGEKNSLSYNENTFLLNCKTIMYLMRKPPKDFEELVKDHFRKRGY
YILKACDVYMKGSLIGSLTEDASVSDKSNANSTSVGFKLMLAKILPKLFVALSEVGADCL
EFKHLQQS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaagaatatgactctgtcggtatggttaatgagcctaccacaagtcgtcat
gataataattctccgaaacaagattattctaccacaagcgggcttgtttgtgatccaagt
gtagatagtgaaagtaaggaagttagcaaacctatggacactgccagtaacaaccacaat
attccatatatctataggcaagatgttgtgaagagaaataacagtggcatgacggggata
gtgactgaagttgcaggtgaaacagattcagatagcagcattactgatgatgaggatgat
gacggtgatgatgatgatgatgatgaagacaatggtggcgagaatgaggaagatggtgat
ggaaatagcaatgccaatgtcaatagtgattggaaaagaggtggtggtaagagtgatcct
ctgccggcagaccaggtgcgagtactttggatggatgaaaatgagtcaaccgtaaatgtt
aatgatgtagcagttgttgaccgtggattcttacatggggattttgttgccactgcttcg
gacccaacggggcaagtgggtgttgtcgtggatgtgaatatctctgttgacttattagct
tcagatgggtctgttatgaaagatgtctcatccaaagatttgaaacgtgtaagggatttc
actgtgggtgactatgttgtccttggtccatggcttggtagaattgatgatgttttagat
aatgtgactgttttgtttgatgatggttctgtgtgtaaggttccaaaagctgagccagta
cgtctaaaaccaatttccaagaatatccttgaagacgggcattttccttattatccaggc
cagcgtgtaagggctagttcttcatcagttttcaagaattctaggtggctatctggctta
tggaaagctaatcggttggaaggcactgttacaaaggttacagtaggatcggtttttatt
tattggatagcatctgccggatatggaccagattcttcaactgcccctgctgaagaacag
agtccaaaaaacttaaaactgttgtcttgtttttcccatgccaattggcaactgggtgac
tggtgtcttctcccctcattggcacttccgtcctccattcccttagacagtgatttatca
aaattagaactgcatcattccatcaatagtgaattagattctactcaactgggaagtgga
tgtgattcagaagaggtttcattggaggaatcaaatgaaaatagtgaatccatggatctt
gatcctgttcctgcagtggatggaaatgatagaaactttcccatcaatgagaccgagtct
agctcttgcggtagttcattgtcagtttctaaggagcctgttcacgagtcttggcctctt
catcgcaagaagatccgtaaagttgttgttaggagggacaggaaaactcgaaagaaagag
gaaagttttgaaagagcccttttgattgtcaatacagtgacaaaggttgatgtggcatgg
caagatggaaagataggacactggttggactcaacaagtttaattccgattgatagtcct
ggtgatcacgagtttgttgctgagcagtatgtggttgagaaggccactgatgatggtgac
gatgttggtgaaatcaggcgtgtcggaattgtgaaaagtgtgaatgccaaggaacgaaca
gcttgtgtgaggtggttaaagccagttacccgtgcagaagatcctcgagagtttgacaag
gaggaaattgtaagcgtctatgagttggagggacatccggattatgattactgctatggg
gatgtagttgttcgattatctccagtttctgtttctgcagaaacagctactggcatagac
tccattgatcaagcaaagcagcaaaatgggccggatgaggttaaacaggatatgaaaagg
cactcaggatgtaagaaagtagatgatgtatctgaatataaagcttgtagtggcttctca
gatctctcttgggttgggaatataactggtcttagcaatggtgatattgaagttacatgg
gctgatgggatggtttcaacggttggacctcaagcaatatatgttgttggtcgggatgat
gatgatgagtcaatggctgctgggagtgaaattagtgatgatgctgctagttgggaaact
gttaatgacaatgaaatggatgcccttgaaaattctcaagaggaagatgggctgcatgat
gcccactacgcaaattctgaaccagaagaaagtggagagaattctggcaaaaatacagca
ctgtcagttcccttagctgcacttcggtttgttacaagactggccactgggatattctca
cggggacaaaagaatatagatccaagctgtttggattccaaagttgaaagtgaggttgaa
tcccagcagatcattcagatttctgagggaaaagattctagtaatgagtctagttctcag
aaatcaaacatcattgatagttttggtacagatgttaaagaagagtttgcctctgaggcc
caaaaactgttagaagcggcagaggcttcaggtaacttgaggactgaagaatcaaatgca
ccagcatgttctggggatgacacttgcggtttcaaacacttcgatatagctaaagatccc
atggaccattattttcttggtgcatatggacagaataacaatggaaggaagtggtataag
aaggttcaacaagattggagcatccttcagaataatctgcctgatacaatctacgtacga
gtttatgaagatcgaatggatctcttacgggctgttatagttggggcatatgggacacct
taccaagatggcctctttttctttgattttcaccttccaccagagtaccctgatgttcct
ccatcatcatactatcattcgggtggctggcggataaatccaaatttatatgaagaaggc
aaggtgtgccttagccttttaaatacttggactggaaaaggaaatgaagtctgggatcca
aagtcttctagcatcctacaagtgcttgtttcgctccagggattggtgctaaattctaag
ccgtattttaatgaggctggctatgataggcagattgggacgcctgagggagagaagaat
tcgttgtcatacaatgagaatactttcttgctaaattgcaagacaattatgtatcttatg
cggaagcccccaaaggacttcgaagagcttgttaaagaccatttcaggaagcgtggttat
tacatccttaaggcctgtgatgtatatatgaaaggtagtttaataggctctctaactgag
gacgcctctgtgagtgataagagcaatgccaattcaacttcagttggtttcaagttgatg
ctagcaaagatattgccgaagcttttcgtggcacttagtgaagttggagctgattgtctt
gaatttaagcatctgcaacagtcttag
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