Carya illinoinensis (pecan): 122309715
Help
Entry
122309715 CDS
T08745
Name
(RefSeq) oxysterol-binding protein-related protein 1C-like isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122309715
Membrane trafficking [BR:
cill04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
122309715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
PH_13
KTSC
Motif
Other DBs
NCBI-GeneID:
122309715
NCBI-ProteinID:
XP_042979240
LinkDB
All DBs
Position
5:43264371..43275855
Genome browser
AA seq
795 aa
AA seq
DB search
MHLHPFCCVSTVSYHSPVLHHMPPLPAATSARSDPPNARTGDKLIHIDNNGDCGRMSHQR
TASAGHSAREQPVDVKINDIVGNGISGILHKWVNYGKGWRPRWFVLLDGVLSYYKIHGPD
KIVVNQETEKGSKVIGEESMRRIKRHNNGTSLPQQPLPRKPFGEIHLKVSSIRESKSDDK
RFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPIDNVTVSTEKLRQR
LLEEGVSEEAIQDSEQIMKSEFTVLQSQLLPLKQKHWLLIETLRQLETEKVDLENTVVDE
SQRQCNDEGASSRLMQDKFSEGSGSESEDDNERVDAAEEETDEEDNTFFDTRDFLSSSSF
KSNGSDFRLSSFSSDDEGFFVVESEDDIDSSIRSVGTNYPHVKRRKKFPDPVEKEKSVSL
WSMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEDLEYSYLIDRAYEWGKKGNSLMRILNV
AAFAVSGYSSTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGTGWR
FWGDSNLKSKFWGRSIQLDPVGTLTLEFEDGEVFQWSKVTTSIYNLILGKLYCDHYGTMR
IQANHEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESMYYVIGDSSGKG
KDYESLSDARLLWKRSKPPEFLTRYNLTRFAITLNELSPGLKEKLPPTDSRLRPDQRYLE
NGEYEMANAEKLRLEQRQRQARKMQEQGWKPRWFAKDKGSDTYHYIGGYWEARKQGNWNL
CPDIFGQIPSDQLSE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcccttttgttgcgtgtctactgtgtcctaccattccccggtgctccac
cacatgccgcctctccccgcggccacgtctgccagatccgatccgccgaatgcccgaacc
ggcgacaaactaattcatatcgacaataacggcgattgtggccggatgagccaccaaaga
acggcttcggcgggtcattcggctcgggagcagccggtggacgtcaagatcaatgatata
gtggggaacgggatctcggggattctgcacaagtgggtgaattacgggaaaggatggagg
ccgcggtggttcgtgttgctggacggcgttttgtcgtactataagattcatggacccgat
aagattgtggtgaaccaagagaccgagaaaggatcgaaggtcatcggcgaggaatccatg
cgaaggattaagaggcacaacaatgggacctcgctcccgcaacaaccccttccccgcaag
cccttcggcgaaattcatctcaaggtttcctcaattcgcgaaagcaaatcagacgacaaa
agattctcgattttcactggcacaaagaggctccacctaagggccgagacgcgtgaagat
cgagtagcatggatggaagcactgcaagctgtgaaggacatgttcccacggatgtccaac
agcgagctaatggctcccatagacaatgtcactgtttcgaccgagaagctgaggcagcgg
cttttggaggagggtgttagtgaggaagccattcaggacagcgagcagatcatgaagagt
gagtttacagtgctgcagagccaactcctaccgctaaagcagaagcactggctccttatt
gagacgctgcggcagcttgagacggaaaaggttgatctggagaatacagtggttgatgag
agccaaagacagtgcaatgatgaaggggcctcttctagattaatgcaagacaaattcagt
gaaggaagtggtagtgagtctgaagatgataatgaaagagttgatgctgcagaggaagaa
acagatgaagaagacaatacattttttgacactcgagactttctttcatccagctctttc
aaaagtaatgggtctgatttccggctatcatctttctcttcagatgatgaaggatttttt
gtagttgaatctgaagatgatattgactcttccattagatctgttggaactaactatcct
catgttaagcgacgtaagaaatttcctgaccctgttgaaaaagagaagagtgtcagtctt
tggtctatgattaaagataacattggaaaggatctcacgaaaatatgtcttcctgtttac
ttcaatgagcctctctcttccctgcaaaaatgttttgaggatctggaatattcatatctt
attgatcgagcatacgagtgggggaaaaagggtaatagcctcatgaggattcttaatgtg
gctgcttttgctgtatctggatattcttcaacggaaggaagaatatgcaaaccatttaat
ccattattaggggaaacctatgaggctgattatccagataaaggcctccgttttttctca
gagaaggtcagtcatcaccctatgatcgttgcctgtcactgtgagggtacaggatggaga
ttctggggagatagcaatttaaagagcaaattttggggtcgatcaattcaacttgatcct
gttggtactctgactctggaattcgaagatggggaagtttttcaatggagtaaggtaaca
acgtcaatatacaatctcatattgggaaagctgtattgcgatcactatggtacaatgcgc
atacaggcaaatcatgagtattcatgtaagctgaaattcaaggagcagtctatcattgac
agaaatcctcaccaggtacatggtatagttcaagacaggaatggaaaaacagtggccact
ctctttggaaaatgggatgaaagtatgtattatgtgattggggactcttctgggaaggga
aaggattatgagtctttatctgatgcccgtctcctctggaagcgtagcaagcctcccgag
tttctcaccagatataacttaacacgctttgctatcacattgaatgagctcagccctgga
ctgaaggaaaagttgccgcctacggattcaaggctaagacctgaccaaaggtatttggaa
aatggagagtatgaaatggcaaatgcggagaagttgcggttggagcagcggcaacggcag
gctcgaaagatgcaagaacagggttggaaaccacgttggtttgcaaaagacaaaggaagt
gatacataccactacattggtgggtattgggaagccaggaaacaaggaaattggaatttg
tgtcctgatatctttggccaaatcccatcggatcagctgtccgagtaa
DBGET
integrated database retrieval system
