Carya illinoinensis (pecan): 122309914
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Entry
122309914 CDS
T08745
Name
(RefSeq) auxin response factor 1
KO
K14486
auxin response factor
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122309914
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
122309914
NCBI-ProteinID:
XP_042979624
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Position
5:541798..555915
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AA seq
670 aa
AA seq
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MAFAVNHSSGSPRAVIPNDALYKELWHACAGPLVTLPWEGERVYYFPQGHMEQLEASMHQ
GSEQHMPSFNLPSKILCKVVNVQLRAEPETDEVYAQITLLPEADQSEITSPDPPLPDPPR
CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRH
IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENAELRVGVRRLMRQLRNMPSSVIS
SHSMHLGVLATASHAIATKTLFSVFYKPRTSRSEFIVSLNKYLEARSHKLSVGMRFRMRF
EGEEVPERRFSGTIVGIEDNNSSGWADSEWRSLKVQWDEPSSILRPERVSPWELEPLVAN
APPSSQSSQRNKRTRPPVLPSPTPDISAIGLWKSPLESPAFSYCESQRGRDFYPSPNFNS
ATKGNSFSFSGNNSVAAVSSNSVYWSNGVEAVTESFSPVVNKESGEKRQGTGNGCRLFGI
QLLDNCNMEDTLPVATMSRTAGDEPYLDAESDQHSEPNRSDVPSVSCDAEKSCLRSPQES
QSRQIRSCTKVHMQGIAVGRAVDLTRFDQYEDLLRKLEEMFDIKGELCGSTQKWQVVYTD
DEDDMMMVGDDPWHEFCSMVRKIFIYTTEEVKRLSPKIKFPVPTEAKPVKPDVEVAVNTE
DQSSIVGPGC
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcggtgaatcattcctctggcagcccccgtgcagtgattccaaatgatgct
ttatacaaggaattatggcatgcttgtgctggcccccttgtcacacttccttgggaaggg
gagcgggtttattactttcctcaaggtcatatggaacagcttgaagcttctatgcatcaa
ggttcagagcagcatatgccttcattcaacctcccatctaaaattctctgtaaagttgtc
aatgtccagcttcgggctgagcccgagacagacgaggtctatgcacagatcactttgtta
cctgaggcagatcaaagtgagattacaagcccagatcctccgctcccagatcctcctagg
tgcactgtccattcgttttgcaagacacttactgcttctgacacgagcactcatggggga
ttttcagttcttcggaggcatgcggatgattgtctgccaccattggatatgacccagcag
ccaccatggcaggaattagttgcaactgatttgcatggaaatgaatggcattttcggcac
attttccgagggcaaccaaggcgccacttgctgacaactggatggagtgtctttgttagt
tcaaaaaaactagtagctggtgatgcatttatattcctgaggggtgaaaatgccgagctg
cgtgttggagtaagaagacttatgagacagctaagaaatatgccatcttctgttatatct
agtcacagcatgcatcttggggttctagcaactgcatctcatgcaattgcaactaaaacg
ctcttttctgtcttctacaagccaagaacaagccgatccgagttcattgtaagtctcaat
aagtaccttgaagcccggagccacaagctatcagtggggatgaggtttaggatgagattt
gagggtgaggaagttcctgaaagaaggttcagtggcacaattgttggcattgaagataat
aattcatctggatgggctgattctgagtggcgatcattaaaggttcagtgggatgaaccc
tcatcgattttgcgtcctgagagagtttctccatgggaattggaaccacttgtagcaaat
gctcctccaagctcccaatcctcacaaaggaacaagcgaacacggccacctgttttacct
tcaccaacaccagatatatctgcaattggtttgtggaaatccccgctcgaatctcctgct
ttctcatattgtgagtcacaacgtgggcgagacttttatccatcacctaatttcaactct
gctactaaaggaaactctttcagcttcagtggtaacaattctgtggctgcagtttctagc
aactcagtatattggtctaatggagtggaagccgtaacagagtccttttcacccgtggtt
aacaaagaatcaggtgaaaagagacagggaactgggaatggctgcaggctctttgggatt
cagcttctggacaattgtaacatggaagacactttgccagtcgctacaatgtccagaaca
gcgggggatgaaccatatttagatgctgaatcggaccagcactctgaaccaaatcgatct
gatgttccttcagttagttgtgatgctgagaaatcatgcttgagatcgcctcaggagtca
caaagcaggcaaattcggagctgcacaaaggttcacatgcaagggattgctgttgggagg
gctgttgatttgacacgatttgaccaatatgaggatctgctcaggaaacttgaggagatg
tttgacattaaaggtgaactttgtggatctacacagaaatggcaggttgtgtatactgat
gatgaagatgacatgatgatggttggggatgacccatggcatgagttctgcagcatggtg
aggaaaattttcatctacacaacagaagaagtcaagaggctgtcgccaaagataaaattt
ccagtccccacagaggccaaacctgtcaagccggatgttgaagtggctgtaaataccgag
gaccagtcatcaattgtgggacctgggtgctga
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