Carya illinoinensis (pecan): 122309917
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Entry
122309917 CDS
T08745
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122309917
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122309917
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122309917
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122309917
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122309917
Ion channels [BR:
cill04040
]
Chloride channels
Chloride channel (CLC)
122309917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
122309917
NCBI-ProteinID:
XP_042979629
LinkDB
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Position
5:complement(577179..583679)
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AA seq
779 aa
AA seq
DB search
MSEDRSKDDNDIEIDFGAGARMQRERSAPSLSSSSSYLREPLLLTKRTNNTSQLAIVGAN
VCPIESLDYEIIENDLFKQDWRSRTKSEIFQYIFCKWTLALLIGLSTGLVGIFNNIAVEN
IAGFKLLLTNNLMLKDKYYQAFVAYAGCNMVLAIAAAALCAYIAPAAAGSGIPEVKAYLN
GIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACVASLLGQGGSRKYRLTWK
WLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVV
AVVLRGFMVFCRGGKCGLFGEGGLIMFDVNSAKPTYSIPDLLAVIFLGVIGGIFGSLYNY
LVDKVLRTYSIINERGPSLKILLAITISLLTSCCSYGLPWLSQCIPCPAYLKDQCPTVGR
TGNYKNFQCPPHHYNDLASLFMNTNDDAIRNLFSSGSEKEFHLSTLIVFFAAIYFLGIIT
YGIAVPSGLFIPVILAGASYGRLLGNLLGSLSDLDVGFFALLGAASFLGGTMRMTVSLCV
ILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKMKGLPYMEAHAEPYMRHLVAS
DVVSGPLVTFSGVEKVGNILHALKITRHNGFPVINEPPFSDAPELCGLVLRSHLLVLLKG
KKFTRQRVMTGTEMMSRFKAHDFAKSGSGKGVKLEDIDIKEDEMEMYVDLHPITNTSPYT
VVETMSLAKAAVLFRQVGLRHMLVVPKTPGRPPIVGILTRHDFMMEHILGLYPHFNPHK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatcgaagcaaagacgataatgacatcgagatagacttcggggctggagct
cggatgcagagggagagatcagctccatcgctctcatcctcgtcttcttacctcagagag
cccctccttctcactaagaggaccaacaacacctctcagctcgctattgttggtgctaat
gtctgcccaattgagagccttgattacgagattatcgagaatgatctttttaagcaagat
tggaggtctagaacaaaatctgagatatttcagtatattttctgtaaatggactcttgca
ctccttatcggtttgagtacagggctcgttggcatctttaataacattgctgttgagaac
atagccggtttcaaacttctactcaccaacaaccttatgcttaaagataagtattatcag
gcatttgtagcatatgctggttgtaacatggttcttgccattgctgcagcagccctctgt
gcctacattgctcctgcagcagcaggctctggaatacctgaggtgaaagcttacctcaat
ggtatagatgctcattctatattggctccaagcaccctctttgtaaagatttttggttcc
atttttggagttgctgctggatttgttgtgggcaaggaaggacctatggtacacaccggt
gcttgtgtagcctctttacttggacagggtggttctcgcaagtatcgtttgacttggaag
tggcttagatacttcaaaaatgatcgggaccggcgggatttgattacctgtggggctgct
gctggtgtagcagctgccttccgtgccccggttggcggggttctctttgcactggaagaa
gcagcttcatggtggaggagtgctcttctttggaggacattttttacaacggctgtagta
gcagtagttttgaggggtttcatggtattttgtcggggtggaaaatgtggactatttggg
gaaggaggcctgatcatgtttgatgtcaattcagcaaagcccacttatagcatcccagat
ctacttgcggtgatattccttggagttattggaggcatatttgggagcctttacaattat
cttgttgacaaggttcttcgaacttatagcatcatcaacgagagaggtccttcgcttaaa
atccttcttgccatcaccatctcccttttgacctcatgttgctcttatgggttaccatgg
ttatcacagtgcattccttgtcctgcttacttgaaggatcaatgccccactgtaggtcgc
actgggaactacaagaatttccaatgtccgcctcaccattacaatgaccttgcctccctc
tttatgaataccaatgatgatgctattcgaaacctatttagctctggttctgaaaaggaa
tttcatttatcgactctaatagttttctttgctgctatatacttcctgggcattataact
tatggaattgctgttccctctgggctcttcatccctgtcatacttgctggggcctcttat
ggacgcctccttgggaatctcctgggttctctctctgatcttgatgtgggcttctttgcc
ctacttggagctgcatccttcctagggggcaccatgaggatgactgtttctctgtgtgtg
atacttcttgaacttactaatgatctattgatgctcccattggtgatgctagttctgctt
atttcaaaaactgtggctgattgtttcaacaagggtgtctatgaccaaattgttaagatg
aaggggttaccttacatggaagcccatgcagaaccatacatgaggcacttggtcgcaagt
gatgttgtttctggtccattagttacattttctggggttgaaaaagtggggaatatatta
catgctctaaaaataacaaggcataacgggttccctgtgattaatgaaccacctttctca
gacgctccggagttgtgtgggcttgttttgaggtcacatcttctggtgttacttaaagga
aagaagtttacaaggcagagggtgatgactggaaccgaaatgatgtcgaggttcaaggcc
catgattttgcaaagtcaggatcgggcaagggggtcaagctggaggatatagacattaag
gaagatgaaatggagatgtatgttgatcttcatcccatcactaatacgtctccatacaca
gtagtggagacaatgtccctagctaaagctgcagttctctttcgacaggttggcctcagg
catatgctggttgtgccaaagacacccgggaggcctccaattgttggaatcctgacaagg
cacgacttcatgatggagcatatactgggactttacccacacttcaaccctcacaagtag
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