Carya illinoinensis (pecan): 122309936
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Entry
122309936 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122309936
04121 Ubiquitin system [BR:
cill04121
]
122309936
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122309936
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122309936
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122309936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-Nse
IBR_1
Prok-RING_1
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
122309936
NCBI-ProteinID:
XP_042979679
LinkDB
All DBs
Position
5
Genome browser
AA seq
396 aa
AA seq
DB search
MCTYPFFQEQTHIPESHKRTVKFTTEVAMSLSPPRVRNNGSPRTTPLYWCFHCHLAVRIA
STNPSEIICPRCNGQFVCEIDVDFTEYDPSPDARLLEALALMLDPPIRLFNNTETESRSR
PWFWQRNRRSVEDRRDPEAEGITRITSPRNGRWLRRRFGGRENLGLEPGILGRPRTWIVV
RPLDPSGPFNPILQPELPVALGVDPRNHRFGPGLDGLMGQLTQNDRPGPSPAPESAINAI
PTVQITKDHLINDSNCPVCKDEFKVGGEARELPCKHIYHSDCIVPWLQLHNSCPVCRNEL
QAPVEEGRRRRMRCLRWSQLATFWPFNARDRRTNQHGDNVDSSRREGRRRRLRCLRWSQL
ATFWPFNARDRRTNQHGDNVDSSRRVNSWRNSCSIL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtgcacgtacccattctttcaggagcaaacgcacatcccagaaagccataaacgaact
gtcaagttcacgactgaggtagccatgtcattgagccctcctcgtgtccgtaataatggc
agtccgaggaccaccccgctctactggtgcttccattgccaccttgcggtcaggattgcc
tccaccaacccatccgagatcatttgcccacgttgtaacgggcagttcgtctgtgagatt
gacgtcgatttcacagagtacgatccctcccccgacgcacgtctactcgaggctctcgct
ctgatgcttgacccgccgatcaggctcttcaataatacagaaactgaatctcgaagccgt
ccttggttctggcagcgaaaccgtcgttcagtggaagatcgtcgggacccagaagcggaa
ggcatcacccgcattaccagtcctcgaaatggaaggtggctgcgtcgcaggtttggcggg
agagagaatctgggcctggaacctggcattctaggacggcctcggacttggattgtcgtt
agacctctggatccttctggccctttcaatcccattctccaaccggaacttccagttgct
ctgggagttgatcctagaaatcatcgttttgggccggggctagacggattgatggggcaa
ctgactcaaaacgataggccagggccttctccggcgcccgaatcagcaatcaacgcgata
ccaaccgtgcaaatcaccaaggaccatttgatcaatgactcaaactgccccgtgtgcaag
gacgagttcaaggttggtggggaagcaagggaattgccctgcaagcacatataccactcc
gattgcattgttccttggctgcagcttcacaattcctgtcccgtttgccggaacgagcta
caggcgccggttgaagagggcaggagacgccggatgcggtgcttgaggtggagtcagttg
gccactttctggcctttcaatgcgagagaccgccgtacaaatcaacacggcgacaacgtc
gattcttctcgaagggagggcaggagacgccggctgcggtgcttgaggtggagtcagttg
gccactttctggcctttcaatgcgagagaccgccgtacaaatcaacacggcgacaacgtc
gattcttctcgaagggttaattcatggaggaattcttgctctattctttag
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