Carya illinoinensis (pecan): 122309940
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Entry
122309940 CDS
T08745
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122309940
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122309940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122309940
NCBI-ProteinID:
XP_042979684
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All DBs
Position
5:complement(37429386..37435452)
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AA seq
659 aa
AA seq
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MDRSRSKRNYYYDHQDYDSETVGRTRPRYNNHYPATPPPPPAHHRHRGGSGRASKPQPDP
SMTVTTTYRILCLDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIAGDEERIIEISDTRR
RDPEGRMPSFSPAQEALLLIHDRILESSDEFGSSGGDDGYGMVGVGGKKVATRLVVSRMH
VGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGEANCVKNAINNIS
TRLRESQHRDRSHFQGRIHSPERFFAPDDDYIPHINSAARRSSIDGAAFGPRLSAHNIRG
NNYASRPSGFTIEGTGSMASYGEDLVFRMLCPSEKVDFVVGEADGILELLRNEIGVDVKV
TESVPGSNEQIIIISSEEGPDDELFPAQEALLHIQNRIVDLVPDKDNIITTRLLVPSCDI
GCLDGRDGSLLEMRRLTGANIQVLPREEIPVCVSGTDELIQIVGEIKAARDALVEVTSRL
RSHLYREFFQKDMTPPSVSAPGPVGSGLGQEASSPNSIITVRDGHTGVDAPSATYQNVQN
VAITQPSRDVGGPGSEIPKQNEIHHREDVPIGLNRITVPLVTRSTLEVVIPDHAVPKLVM
KSKNKLAQISELSGANVTLIEDRPELTQKIIQISGTPEQAERAQSLLQGFILSTQEDGP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtcaagatctaagaggaactactactatgaccaccaggactatgattcggag
acggtgggtaggacgaggcctcgctacaacaaccactacccggccactcctcctcctcct
cctgcccaccaccgtcaccgaggcggttcgggtcgggcatctaagccccagcccgatccc
tctatgactgtgactaccacgtatcgcatcctctgcctcgacatgaaggctggtggggtg
atcggcaagtccgggagcatcatcaagtcgatccggcaacacacgggcgcgtggatcaac
gtccatgagcttatcgctggcgacgaagagcggatcatcgagatctctgacacgcgccgc
cgggaccccgagggccgaatgccctctttctctcctgcccaggaggccctgctcctcatc
catgataggatcctcgagagcagcgacgagttcggctctagcggcggcgatgatggctac
ggaatggttggtgtgggagggaagaaggtggcgacgaggctggtggtgtcgagaatgcat
gtggggtgtttgttggggaaaggaggcaagattattgagcaaatgaggattgagaccaag
acccagattaggattctgcctagagatcataatctgccccgttgcgtttccatgtccgag
gagattgttcaggttgtaggtgaagcgaattgtgtaaagaatgctataaataatatttca
acacgcttgagggagagtcagcatcgagaccgcagtcatttccagggacgaatacactcc
ccagaacggttttttgctccagatgatgattatatccctcacataaacagtgcagcacgc
agatcatccatagatggtgctgcctttggaccaagattatctgcccacaatatcagaggc
aacaactatgcctcacggccatctggttttacaattgaagggactggctccatggcctca
tatggtgaggacctcgtgtttcgaatgctttgcccaagtgagaaggtggattttgtcgtt
ggagaagcagatggaatcttagaattgcttcgaaatgaaattggcgttgatgttaaggtt
actgaatctgtacctggttcaaatgagcagattataattatttcttcagaggagggtcct
gatgatgagctgtttccagctcaggaagctttgttgcatatccaaaaccgcattgttgat
cttgttccagataaagacaatattataacgactagattacttgttccatcttgtgatatt
ggatgtttagatggaagagacggatcgctgttggagatgaggagattaactggtgcaaat
atacaagttttgccaagagaagaaatccctgtgtgtgtgtcagggacagatgaacttata
cagattgttggggagataaaagcggctcgagatgctcttgtcgaggtgacatcaagacta
cggagtcacttatatagggaattctttcaaaaggacatgacacccccttctgtctctgca
ccaggccctgtgggtagcggtctgggacaggaagcgtcttctcccaatagcataattact
gttcgggatggtcacaccggagttgatgctcccagtgcaacatatcagaatgtgcaaaat
gtggcaataactcagccatcaagggacgttggagggcctggcagtgaaataccaaagcag
aatgaaattcaccaccgggaagatgttccaattggtttgaatagaatcactgtaccactt
gtcactaggagtacacttgaagttgtcataccagaccatgcagttcccaagctcgtaatg
aaatcaaagaacaagcttgctcagataagtgagctgtcgggagccaatgtaaccctgata
gaagatagacctgagttgactcagaagatcattcaaatatcaggcactccagagcaggcg
gagagagcccaaagcctgcttcagggctttattttaagcacacaagaggatggtccttaa
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