Carya illinoinensis (pecan): 122310522
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Entry
122310522 CDS
T08745
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122310522
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122310522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
zf-RVT
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122310522
NCBI-ProteinID:
XP_042980399
LinkDB
All DBs
Position
5:26622786..26646527
Genome browser
AA seq
734 aa
AA seq
DB search
MKRVFEEISDDEWDNHSFKPSRVLGNHQKPPPPIEAFAYGSSNPQHSDRSCSDDCVDITD
VLEKKCFDLEDEDVEVEGTRPTTNRGRRFVVDDEESNGDFNEFYEVKSSPEVQEDDENVD
VVGKALHKCAKISTELKRELYGSSLTTCSRYAEVEASSVRIVTQDDIDAACRSEDSDFQP
VLKPYQLVGVNFLLLLYQKGIGGAILADEMGLGKTIQAITYLTLLKHLNNDPGPHLIVCP
ASVLENWERELKKWCPSFSVIQYHGAARAVYSKELSSLAKAGLPPPFNVVLVCYSLFERH
SAKQKDDRKFLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL
HELWSLLEFMMPDLFVTEDVDLKKLLNADDMDLIGRMKSILGPFILRRLKSDVMQQLVPK
IQRVEYVVMEKQQEDAYMEAIEEYRATSRAHIAKSSEINSNNLFGVLPRRQISNYFVQFR
KIANHPLLVRHIYSDEDVVRFAKKLHPMGAFGFECTLDRVIDELKGYNDFSIHQLLLHYS
VTATKGILSDKQVMLSAKCRALAELLPSLKQGGHRVLIFSQWTSMLDILEWTLDVIGVTY
KRLDGRVAREQEALMADILEMLGGSIQWNVNFIRAPHDWEVGSFSDFFSLLYSTGFRARG
TDRMWWVPPRKGTFSIRSFYKTLANLHNNHLPWKIILRNKAALKAVFFTWTAPLGKILTM
DNLWECRVIVVDWC
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgtcttcgaggaaatctccgacgacgagtgggacaaccactccttcaaaccc
tctcgcgtcctcggaaaccaccaaaaacctcctcctcctatcgaagcctttgcttacggc
tcctctaacccccaacactccgaccggagctgcagcgacgactgcgtcgatatcacggat
gttttggagaaaaaatgttttgatttggaggacgaggatgtggaggtagagggcacaaga
cccacgacgaaccgtggtcgtcggttcgttgtcgatgatgaggagagtaatggggatttc
aatgaattctatgaagtaaagtcgagccccgaggtacaggaggacgacgaaaatgttgat
gtggtcgggaaggctttgcacaagtgtgcaaagatatcgacggagttgaagagagagctg
tacggctcctcgctgaccacgtgcagccgttacgcggaagtagaggcttcttctgtgagg
attgtgactcaggatgatattgatgcggcatgtaggtcagaggattcggattttcaacct
gttctcaaaccataccagctggtcggtgtcaactttcttctcttgttatatcaaaagggt
attggtggagccatattggcagatgagatgggccttgggaagactatacaggctattaca
tatttgaccttactgaaacacttgaacaatgatcctggtccacatttgattgtatgtcct
gcttctgttttggaaaactgggagagggaacttaaaaagtggtgtccatcattttcagtt
atccaatatcatggggctgcacgagcagtgtattcgaaagagttgagctctttagctaaa
gcaggattgccacctccttttaatgttgttcttgtatgttattcactttttgaaagacac
agtgcaaagcagaaagatgaccgtaaatttctgaaacgttggcgatggagctgtgtgctg
atggatgaagcccatgccttgaaggataaaaatagctataggtggaaaaaccttatgtct
gtcgcacggaatgcaaaccagcggctaatgctgacaggaacaccactccagaatgatcta
catgagctgtggtcgttgctggagtttatgatgcctgatctttttgttactgaggatgtt
gacctgaaaaagcttttaaatgcggatgatatggatttgattggtcgtatgaagtctatt
ttaggaccatttattttgagacggttgaaatctgatgtaatgcagcaacttgttccaaag
attcaaagggttgagtatgttgtaatggaaaagcaacaggaagatgcatatatggaagct
attgaggagtatcgtgcaacttcacgagctcacattgctaaaagctcggagataaactcg
aataatctttttggagttcttccacggcgtcaaatatctaactattttgttcagtttcgt
aagattgcaaatcatcctttattggttagacatatttacagtgatgaggacgttgttcgt
tttgctaagaagttacatccaatgggtgcttttggctttgaatgtaccttggaccgagta
attgatgaactaaagggttataatgacttctccattcaccagcttctacttcattacagt
gtcactgctacaaagggaattctttctgacaaacaggttatgctttcagcaaaatgccgg
gcattggctgaacttcttccttcactaaagcaaggtgggcatcgtgttctgatttttagc
cagtggacatcaatgcttgatatcttggaatggactttggatgtgattggggttacatat
aaacgactcgatggaagggttgcacgagagcaggaggcattgatggcggacatattggag
atgttgggtggctcaattcaatggaatgtaaactttattagggcgccgcatgattgggaa
gttggcagtttctctgattttttcagcctcttgtactccacggggttcagggctcgaggg
actgacaggatgtggtgggtaccccctagaaaaggaacattttctatccgttccttctat
aagacacttgcaaacctgcataacaatcatcttccttggaaaatcattttgagaaataag
gcggctctaaaggcggtatttttcacatggactgctcctttgggcaagatcttgactatg
gacaacctatgggaatgccgggtgattgtagttgattggtgttga
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