Carya illinoinensis (pecan): 122310545
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Entry
122310545 CDS
T08745
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122310545
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122310545
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122310545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
PHD
zf-RING_16
PHD_NSD
VPS18_RING_C
Prok-RING_1
zf-C3H2C3
FANCL_C
RINGv
Motif
Other DBs
NCBI-GeneID:
122310545
NCBI-ProteinID:
XP_042980446
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All DBs
Position
5:29088672..29096830
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AA seq
329 aa
AA seq
DB search
MENNDNNLDVNKPDTNHNNRDGQEHEGNPNHVNVEGMQQQQEHEEEEEGSESDLEPQPPQ
PSRTPFTNLSQVDADLALARALQEQERAYMMLRMNNEGSDYGSWEGGSYVLDDDSDGDDD
DDDEEDGEERYDGSNVDDDEDAFDVHAHDEAGENNNPSIEFDPAAFSSDEAYARALQDAE
DREMAARLLALAGINDVEAEDMEDHGGNSQDTWEEVDPDELSYEELIALGEVVGTESRGL
SADTIASLPSVNYKSGSSQNGSNDSCVICRLDYEDGETLTVLSCKHSYHSECINNWLKIN
KLGATTVCLLQHDLPCECRSALFAVLRFP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacgacaacaatctcgacgtcaacaaaccggacaccaaccacaacaaccgc
gatggccaagaacatgaaggcaaccctaatcatgtgaatgttgaggggatgcaacaacaa
caggaacatgaagaagaagaagagggaagtgaatccgacttggaacctcagccacctcag
ccctccagaaccccctttactaatctcagtcaggtcgatgctgacctcgctctcgctcgt
gcccttcaagaacaggaaagggcatatatgatgctgcgaatgaataatgaagggagtgat
tatggaagttgggaaggcggaagctatgtgcttgatgatgacagtgatggggacgatgat
gatgatgacgaggaggatggtgaggagagatatgatggaagcaatgttgatgatgatgag
gatgcttttgatgtgcatgcccatgatgaggctggagagaataataaccccagcattgaa
tttgatccggctgccttttcgagtgacgaggcctatgcaagagccctacaggatgctgaa
gacagagaaatggctgctaggttgttggcccttgcagggataaatgatgtggaagctgag
gacatggaggatcatggtggtaactcccaggacacatgggaggaggttgatcctgacgag
ctttcctatgaggagttgattgcgcttggtgaagtagttggaacggagagcagagggctt
tcagctgatacgattgcctctttgccttcagtaaattacaagtctggaagcagtcaaaat
ggaagcaatgattcgtgtgtcatttgccgcctggactatgaggatggtgaaaccttaacg
gtgctttcttgcaaacattcctatcattctgaatgcataaacaattggttgaaaataaac
aagttaggagccacgacagtctgtctgctgcaacatgacttgccctgtgaatgcaggtct
gccctgtttgcagtgctgaggtttccataa
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