Carya illinoinensis (pecan): 122310547
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Entry
122310547 CDS
T08745
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00600
Sphingolipid metabolism
cill01100
Metabolic pathways
Module
cill_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122310547
Enzymes [BR:
cill01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
122310547
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
122310547
NCBI-ProteinID:
XP_042980451
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Position
5:complement(12075255..12083973)
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AA seq
540 aa
AA seq
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MDYSPKSFLIRFRASANSFLSEYEPLALLLAPLLAFLVARTLQSFLCVVHERGLKATFIA
FLMSLLKLVPGVKSYIDAEKQKVVDKLQSGGKSKRDGWRTELPRAGLGVEVIEKMKDEKR
NDVVWQGKCSGTVYIGGSESEGHFSLINEACSMFAHTNPLHLDVFPSVVRFEAEVVAMTA
GLLGSKEKGSGGQICGNMTSGGTESILLAMKSSRDYMKTKKGITKPEIIIPESAHSAYDK
AAQYFNIKLWRVPINKEFRADVKAIKRHINRNTILIVGSAPGFPHGIIDPIQELGELATS
FGICLHVDLCLGGFVLPFARKLGYPIPPFDFSVKGVTSISVDVHKYGLAPKGTSVVLYRN
HDIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAMLSLGEEGYLDTTKRIMEVSK
RIQKGIEEIPELFIIGRPDMTIVAFGSEVVDIFEINDVMSSKGWHLNALQRPNSIHICVT
LQHEPIVEDFLRDLTESVKTVKENPGPISGGLAPVYGAAGRMPDRGMVQELLVNYMDSTC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggattattctccgaagtcgttcttgattcgtttcagagcttctgcgaattcgttccta
tcggaatacgagcctctggctctgcttctcgctcccctcctcgcttttctcgtcgctcgg
acgcttcaatcatttctctgtgtggttcacgaacgaggactcaaagcaaccttcatagcg
ttcctcatgagcctcctcaagttggttcctggtgtcaagagttacatcgatgccgagaaa
cagaaggttgtggataagttacagtctggtggtaagtctaagcgagatggctggaggacc
gagctgccgagggcaggtttgggagttgaggtcatagagaaaatgaaagatgagaaaaga
aatgatgtggtttggcaaggaaaatgctctggtacagtctacattggaggaagtgagtct
gaaggacatttttctctgattaatgaggcatgttcaatgtttgcacataccaatccattg
catttggatgtattcccgagcgtagtacggtttgaagcagaagtggttgcaatgacagct
ggactgcttggcagtaaagaaaagggttcgggaggacaaatatgtggaaacatgacatca
ggtggaactgaaagcatattgttagccatgaaatcatcacgtgactacatgaaaaccaag
aagggaattacaaaacctgaaataataatacccgaatctgcacactcagcatatgacaag
gctgcacaatattttaacatcaagctgtggcgtgtccctataaataaagaatttcgagca
gatgtcaaagcgattaaacgacatattaaccgaaacacaattttgattgttggatccgca
cctgggtttcctcatggcatcattgatcctattcaggagcttggtgaattagctactagc
tttggaatttgtctccatgttgatctttgtcttggtggctttgtactaccttttgctagg
aaacttgggtacccgattccaccttttgatttttctgttaaaggagtgacctcaatatct
gtggatgtgcataaatacggcttggctcccaaaggaacaagtgtagttctgtacagaaat
catgatataagaaagcatcaatttgttgctgttactgagtggtcaggagggctgtatgta
tctccaacaattgctgggagcaggcctggcggcttgattgctggggcttgggcagcaatg
ctgtctttgggggaagaaggatatttggataccacgaaaaggatcatggaagtgtcaaag
agaatacagaaagggatagaggaaattcctgagttatttatcattggaaggccagatatg
acaattgtggcatttggttctgaagttgtggatatatttgaaatcaatgatgtcatgtca
tccaaaggttggcatttgaatgcgctgcaaagacccaacagcattcatatatgtgtgact
cttcaacacgaaccaatagttgaggatttcctcagggatttgacagagtcagtgaagact
gtgaaagaaaatccaggtccaataagtggaggtctagcgcccgtatatggcgctgcaggg
agaatgccagatagagggatggtgcaggaattgttggtcaattacatggacagtacatgc
tag
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