Carya illinoinensis (pecan): 122310604
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Entry
122310604 CDS
T08745
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122310604
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122310604
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122310604
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
122310604
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122310604
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122310604
Prokaryotic type
122310604
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
122310604
NCBI-ProteinID:
XP_042980584
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Position
5:19583233..19604045
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AA seq
720 aa
AA seq
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MLCTRLRAALSIQFRRSSSSTPSPFPYIHSLPRHFSSTPLPIASMASNHPKDEAYLRKVI
PKRIQLFQSIQSRQLAQRESLPADPIKIALPDGTVKEGKKWVTSPMDVAKEISKSLAANA
LISQVNGVLWDMTRPLEDDCELKLFTFDSDEGRDTFWHSSAHILGESVEQEYGCKLCIGP
CTTRGEGFYYDAFYGDLGLNDDHFKQIESAAMKAVADKQPFERIEVSKDEALQIFSENHF
KIEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAIACLKASSAYWRGNKDRESLQ
RVYGISYPDKKRLQEYIKQLEEAKKYDHRLVGTKQELFFCHPLSPGSWFFLPHGARIYNK
LMDFIRSQYRERGYQEVLSPNMYNMQLWETSGHAANYKENMFVFEVEKQEFGLKPMNCPG
HCLMFQHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKEE
VRGVLDFIKHVYDVFGFTFDLKLSTRPEKYLGDLATWERAEAALAEALDESGKPWQINEG
DGAFYGPKIDISVSDALNRKFQCATLQLDFQLPARFELYYSAEDEAKRETPVMIHRAVLG
SVERMFAILLEHYKGKWPFWLSPRQAIVCPVSEKSQPYALKVQDQIFRAGYHVDVDTTDR
KIQKKIREAQLAQYNFILVVGEEEANTGQVSVRVRDKADHSVMSIESLLKHFEGEIAAFH
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcactaggctcagggctgccctctccatccaattccgccgctcctcctcctcc
actccttcgccttttccttacatacactctctcccccgccatttctcttcgacgccacta
ccaatcgcctccatggcatccaatcaccccaaagacgaagcgtacctccgtaaggtcatc
cccaaacgcatccagctcttccagtccatccaatcccggcaactcgctcagcgcgagtcc
ctccccgccgatcccatcaagattgcgttaccggatgggactgtgaaggaggggaagaag
tgggtgacttcgccgatggatgtggcgaaagagatctcaaagagtctggctgcgaacgcg
ttgatttcgcaggtgaatggggtcctctgggacatgacgaggcccttggaggacgactgt
gagctcaagttgttcactttcgatagcgacgaaggccgcgacacattctggcattccagc
gcgcacattctcggcgagtcggtcgagcaggagtacggttgcaagctgtgcattggaccc
tgtaccacaagaggagagggtttctattatgatgcattttatggtgatttgggcttgaat
gatgatcacttcaagcaaattgaatcagcggcaatgaaggctgttgcggataaacagcct
tttgagcgcattgaagtatcaaaagatgaggcacttcagatattttctgaaaatcatttc
aagatcgaaatcataaatgatttgcctgcagacaagacaatcacagtgtacagatgtggc
cccctggttgatttgtgtcgtggaccgcatataccaaacacatcctttgtcaaagcaatt
gcttgcttgaaggcttcatcagcttactggagggggaataaagatcgtgagagtttacaa
agagtttatggaatttcttaccctgataaaaaacggcttcaggaatatatcaaacagctg
gaagaagcaaagaaatatgaccatagactagtgggtacaaaacaagagcttttcttttgt
catccactcagcccgggaagttggttcttccttcctcatggggctcggatatacaacaaa
ttaatggattttattcgcagtcaatatagggagagaggataccaagaggttctgtcacca
aatatgtacaatatgcaactttgggaaacatctggtcatgctgcaaattacaaggagaat
atgtttgtatttgaggtagaaaaacaagagtttggactgaaaccaatgaattgccctggg
cactgtttaatgtttcaacatagagttcgctcatatagagaacttccacttcgactggcc
gattttggggttttgcaccgcaatgaggccagtggcgcactcactggattaactcgtgtc
cggagatttcagcaggatgatgctcatatcttctgccgggagtcccagataaaagaagaa
gtacggggtgtcttagacttcatcaaacatgtctatgatgtttttgggttcacttttgac
ttgaagctatccacgaggcctgagaagtacttaggagacttggctacatgggagagagca
gaggctgcacttgcagaagcattggatgagtctggaaagccctggcagataaatgaagga
gatggtgcattttatggaccaaagatagatatcagtgtatctgatgcattgaataggaaa
tttcaatgtgcaacattacagttggatttccagcttcccgctcgttttgaattgtattac
tcagcagaggatgaagccaagagggagacccctgttatgatacacagagctgttctagga
tctgttgagcgtatgtttgccatactcttggagcactacaaaggaaaatggcccttctgg
cttagtccacgtcaagctattgtttgcccagtgtcggagaaatctcagccatacgcgcta
aaggtgcaagatcagatatttagagctggttatcatgtcgatgttgatactactgataga
aagatccagaaaaagataagagaagctcaattggcacagtacaactttatattggttgtt
ggggaggaggaagccaacactggacaggtgagtgtacgagtcagagacaaggcagatcat
tcagtaatgagcattgagagccttctgaagcactttgagggagaaattgcagcattccat
tag
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