Carya illinoinensis (pecan): 122310651
Help
Entry
122310651 CDS
T08745
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122310651
Spliceosome [BR:
cill03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122310651
Other components
Complex C specific factors
122310651
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
122310651
NCBI-ProteinID:
XP_042980675
LinkDB
All DBs
Position
5:complement(39887280..39890523)
Genome browser
AA seq
875 aa
AA seq
DB search
MDDYQEMERFGTENDFEDGQWIGGEFYYRKRKEKRTQTKDDVLYGVFADSGSDSDGDYST
KKRRRDPNLYKKADLSKPVNFISTGTVLPTQEIDQNSKKENNDDYENDDDKPGLGLGFGS
ASSGLGLGFNSSSNGVRKNEEYGNGNKGNSGGENDDDDIFLPSAFGKKIKEGAMRREKER
AEKSKVDKGKRVKDQGFVGGSDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNAQGIVAPIE
AKLRPKNMGMGFNDYKETKLPPALKELEEKKGSGGVAENVGRVKERRWSKQARKKKEEYV
TAKELLERKAEQGFGEVVQKVYDMRGPQVRVLTNLENLNAEEKAREEDVPMPELQHNLRL
VVDLAELEIEKIDRDLRHEKEAVEMLSNQKEKLVVEAERQKQQLGSMEEILGVLDRLGDE
NSMGKLTLDSLAKCFGDLQRKFPDDYKICNLSCIACSYALPLFIRVFQGWDPLQNPFHGL
EVVSLWKTLLQGENSHDIWDTGSSPYAQLVSEVVLPAVRISGVNTWQARDPEPMLRFLDS
WDKLLPPSVLQYILDNIVMPKLSSAVGSWEPLRETVPIHIWMHPWLPYLGHKLEGMYQTI
RVKLSQILGAWHPSDVSAYTILSPWRTVFDSVSWEQLMRRFIVPKLQLVLQEFQVNPSIQ
KLDEFYWVMNWASDVPIHLMVDMLEKLFFPKWLLVLYHWLQSNPNFEEITKWYLGWKELL
PKELLANESIRYQLNLGLEMMNQAVEGLEVVQPGLKENISYFRVLEQRQFEAQQKAAAQQ
AAASLSGVANMDGMGGAVDMSLKEVIEAHAQQHGLLFKPKPARMHNGHQIYGFGNVSIII
DSLNQKVYAQTDEAWSLVSLQDLLDKHNSFLTKRR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatgattaccaggagatggagaggttcgggacggagaacgacttcgaggacgggcaa
tggatcggcggcgagttctactacaggaagcgcaaggagaagcgcactcagaccaaagac
gacgtactctacggtgtcttcgctgactccggctccgattctgacggtgattactccacc
aaaaagcgccgtagagatcccaatctctacaagaaggccgacctctccaagcccgtcaat
ttcatttccaccgggaccgtattgcccacacaggaaatcgatcagaattccaagaaagaa
aacaacgatgattatgagaacgacgacgacaaacctgggttggggcttgggttcggttcg
gctagctctgggctgggtctagggttcaattcgagttctaacggggttcgtaagaatgaa
gagtacggtaatggtaacaagggtaatagtggaggtgaaaatgatgacgatgacattttt
ttgccatcggcgtttgggaaaaagattaaggaaggggctatgaggagggagaaggagaga
gcggagaagtcgaaagtggataagggtaagagagtgaaagatcaagggtttgtaggtggg
agcgatgttggtgggtttgagaagcacacgaaggggattgggatgaagttgttggagaaa
atggggtacaagggcggtgggctaggcaagaatgcgcaagggattgtggcgccaattgag
gcgaagttgcggcctaagaatatgggcatggggttcaacgattataaggagacgaagttg
ccgccggcgttgaaggagctcgaggagaagaagggttcggggggtgttgctgagaatgtg
gggagagtgaaggagaggcggtggtcgaagcaggccaggaagaagaaggaggagtatgtg
actgccaaagagttgttggaaaggaaggcggagcaggggttcggtgaagtggttcagaag
gtttatgatatgaggggtccgcaggtccgggtgcttactaatttggagaatttgaatgca
gaggagaaggcgagggaggaagacgtgccgatgccggagcttcagcacaatttgaggtta
gttgtggacttagcggagctcgaaattgagaagattgacagggacttgaggcacgagaag
gaggcggtggagatgctgagcaatcagaaggagaagttggttgttgaggccgagaggcag
aagcagcagttgggtagtatggaagagatattgggcgtgttggaccgtttaggagatgag
aattcgatgggaaagttgacgttggactcgcttgcgaagtgtttcggggatttacagaga
aaatttcctgatgattataagatatgtaacttgtcctgcattgcatgctcatatgctttg
cctttgtttattagagtgtttcagggatgggaccctcttcagaatccctttcacgggttg
gaggttgtgtctttgtggaagactttgcttcagggtgaaaattctcacgatatctgggat
actggttcttcgccttatgcccaattggtatctgaagttgtgttaccggctgtgagaatt
tctggcgtcaatacttggcaggccagagacccagaaccgatgctacggtttttggattcc
tgggacaagttgttacctccttcagttctccaatatatcttggataacattgtgatgccg
aaattgagtagtgctgtgggctcttgggaaccactgcgggaaactgttccgatccacatt
tggatgcatccatggttaccgtatttgggacacaaattggagggtatgtatcagacgata
cgtgtcaagttgagtcaaattcttggtgcttggcacccgagtgatgtgtctgcgtatact
atattgtcaccttggaggactgtgtttgattcagtgagttgggagcagcttatgcgtaga
tttatagttccaaagttgcagcttgttcttcaggaattccaagtaaacccgtcaattcag
aagcttgatgaattttattgggttatgaactgggcttctgatgtaccaattcatcttatg
gttgatatgttggagaagttattttttcccaagtggctactggtcttatatcactggtta
cagtcgaacccaaactttgaggagattacaaaatggtacctgggctggaaggaacttctt
ccaaaggagctgctggccaatgaaagcatccggtatcagcttaaccttggtcttgagatg
atgaaccaggctgtagaaggtttggaggtggtccaacctggtctgaaagagaatatcagc
tactttagggtacttgagcaaaggcaatttgaggctcagcagaaagcagcggcacagcaa
gcagctgcaagcctcagtggtgttgcaaatatggatggtatgggtggtgccgttgacatg
agcttgaaagaagttattgaggcccatgcccaacagcatggattactgtttaagcctaaa
cctgccaggatgcacaatggtcaccagatatacggtttcggtaatgtaagcattataatt
gactctttgaatcaaaaggtgtatgcccaaaccgatgaagcgtggtcccttgtatccctt
caagatttgctggacaagcacaatagttttcttacaaagagacgctga
DBGET
integrated database retrieval system
