Carya illinoinensis (pecan): 122310652
Help
Entry
122310652 CDS
T08745
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00730
Thiamine metabolism
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122310652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122310652
Enzymes [BR:
cill01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
122310652
Ribosome biogenesis [BR:
cill03009
]
Prokaryotic type
GTPases
122310652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_16
nSTAND1
AAA_29
AAA_23
AAA_21
AAA_22
SMC_N
Guanylate_kin
IIGP
AAA_30
AAA_15
P-loop_TraG
AAA_28
nSTAND3
AAA_7
VapE-like_dom
Septin
Adeno_IVa2
ATP-synt_ab
Roc
Motif
Other DBs
NCBI-GeneID:
122310652
NCBI-ProteinID:
XP_042980676
LinkDB
All DBs
Position
5:complement(12573045..12576221)
Genome browser
AA seq
482 aa
AA seq
DB search
MPIASFPTFNNLLLRRFSTVRCLSVSAKQQNPSNVSKRPQPDKNLLRAKQNFRGYSSSLA
PVLSPRDPPPLSESQAIGTVAAAQANFMRVIVQSLPSSEPSRSVIEGSESSGIGVELLCV
VRAVLKKIKRRVLVGDKVLVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSLE
QPRPEAFTLTRFLVEAESTGIPLTLALNKSELVDEEILVGWRNRLRSWGYEPVFCSVEST
CGLDTLASFLQDQTTVIVGPSGVGKSSLINALRSNYHASDAAGEDNWFDPILGSKWFEEQ
RVGEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKVTKQSLAQAFPEIRKML
SDNEPAKCSFNDCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVR
YKVGDMGVQQAEPRLEPKKHRRKSRKSINQSILDELDELDDDQDDLELENDPILRAMRNE
NQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcctccttccctaccttcaacaacctcctcctccggcgcttctcaacagtc
cgatgcctctcggtctccgccaaacaacaaaaccctagcaatgtctccaagagaccccag
ccggacaagaacctgctcagagccaagcagaacttcagaggctactcctcatctctggcc
ccagtcctctccccacgagacccgcctcctctctccgaatcccaagccatcggcaccgtc
gccgccgcccaggccaacttcatgcgcgtcatcgtccaatcgctcccatcctctgagcct
tctagaagcgttatcgagggttcagaatcttctggaatcggagttgagctgctgtgtgtg
gtgagggcggtgttgaagaagataaaaaggagggtgttagttggagacaaagtgttggtg
gggtccatcgattgggtggaccggcggggcatgatcgagaacgtcttccagcggagttcc
gagattctggaccccccggtggcgaatgtggaccatttactggtgctcttctcgttggaa
cagccgaggcccgaggccttcacgctcacgaggttcctggtggaggccgagtcgaccggg
attccgctcactcttgcactgaataaatccgagcttgtggatgaagagatactggttgga
tggaggaacaggctacgaagttggggctatgaaccagtattttgcagtgttgagtctaca
tgtggattggatactcttgcatcttttctgcaagatcaaacaactgtaattgtgggccca
agtggagtagggaagtcgagcctgattaatgcactgagaagcaactatcatgcttctgat
gctgcaggagaggataattggtttgatcccattctcggcagcaaatggtttgaggaacag
cgtgttggggaagtttcaacaagaagcggcagagggaagcataccactcgccatgtttct
ctgcttccattatcaggagggggttatcttgctgatactcctgggtttaaccagcctagt
ttgatgaaagtaacaaaacagtctcttgcacaagcgttccctgagatccggaaaatgctt
agtgataatgagcctgcaaaatgttcattcaatgattgcttgcatctaggggaaccaggg
tgcattgtgaaaggggattgggaaagatactcgtactattttcaacttcttgatgaaatc
agaatcagggaggagtttcagctcaggacgtttggaaccaaaagagaaggcgatgtgagg
tacaaggtgggagatatgggtgttcagcaagcagaaccgcggttggagcctaagaagcat
aggagaaaatctcggaagagcatcaaccaatcaatactagatgagttggatgagctggat
gacgaccaggacgacttagaattagaaaatgatcctatcttaagggcaatgagaaacgaa
aaccagtag
DBGET
integrated database retrieval system
