Carya illinoinensis (pecan): 122310723
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Entry
122310723 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122310723
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122310723
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122310723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122310723
NCBI-ProteinID:
XP_042980778
LinkDB
All DBs
Position
5:complement(31578100..31583260)
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AA seq
494 aa
AA seq
DB search
MGGKSSKGSGRRGVASYGPGGSSSRNQYGYAQPSYPQQDPYYTPQHPHAPPPSTSFNYGS
QPSFNYGSQPSFNYGSELPQPQRTLDRRYSKIADNYRSLNEVTAALSHAGLESSNLIVGI
DFTKSNEWTGARSFNRRSLHHIGNGQNPYQRAISIIGKTLSAFDEDNLIPCFGFGDASTH
DQDVFSFYPDERYCNGFEEVLTRYREIVPELKLAGPTSFAPIIEMAITIVEQSVGQYHVL
VIIADGQVTRSVDTQSGQLSPQEQKTINAIVKASEYPLSIILVGVGDGPWDMMREFDDNI
PARAFDNFQFVNFTEIMSKNVDSSRKETEFALAALMEIPSQYKATIELGILGRQRGNSID
RVPLPPPQYGSGSRSLKPQHSSSFKHSSPYGGYDPPYTGYDAAVGTGYDAAVGTGYDAAV
GAGYDAAIGTGYDAEVSTAPSSSSLYDNLVCPICLTNRKDMAFGCGHQTCCDCGEDLEVC
PICRRAIETRIRLY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaaaagttcgaagggctcgggtcggagaggagtggcgtcatatgggcctggt
ggttcttcatcacggaatcagtatgggtatgcacaaccatcgtaccctcagcaagaccct
tattacacgcctcagcatccccatgctccaccgccctctacttcttttaattatggctcg
caaccatcttttaattatggctcgcaaccatcttttaattatggctcggagctaccccag
ccacagagaacattggatagaagatactcgaagattgcagataactaccggtccttgaat
gaggttactgctgctctttcacatgctggcctagaatcttctaatttaattgttggtatt
gatttcacaaagagcaatgagtggacaggtgctaggtcattcaaccgacgaagtttacat
cacatcggaaatggtcaaaatccctatcaacgagcaatatcaattattggaaagacttta
tctgctttcgatgaggataacttaattccctgttttggatttggagatgcatctacacat
gatcaagatgtcttcagtttctacccagacgagagatattgtaatggatttgaggaagtt
ctgacacgatacagagaaattgtccctgaactgaaactcgcaggaccaacatcttttgca
cctataattgagatggccataactatcgtggagcaaagtgttggccaataccatgttcta
gtgataattgctgatgggcaggtgacaagaagtgttgatactcagtctggccaacttagc
ccacaagaacaaaagacgattaatgcaattgtaaaagcaagtgagtatcctttgtcaata
atattggtgggggttggagatgggccttgggacatgatgagggaatttgatgataacatc
cctgctcgagccttcgataatttccagttcgtgaatttcacggaaatcatgtcaaagaat
gtggattcatctagaaaagagactgaattcgctcttgcggccctgatggagataccttct
caatataaagctactattgagcttgggatattaggtagacaaagggggaattctatagac
agggttcctcttcccccacctcaatatggttcaggttctagaagcttgaaacctcagcat
tcaagcagctttaagcactcatctccttatggtggatatgatcctccttatactggatat
gatgcagcagttgggacaggatatgatgctgcagttgggacaggatatgatgctgcagtt
ggggcaggatatgatgctgcaattgggacaggatatgatgctgaagtcagcacagctcca
tcatcaagttctctctacgataatctggtttgccctatttgtcttactaatcgaaaggac
atggcctttggttgtgggcatcagacttgttgtgactgtggagaagatctcgaggtgtgc
cccatttgccggcgggcaattgagactagaataaggctctattga
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