KEGG   Carya illinoinensis (pecan): 122310769
Entry
122310769         CDS       T08745                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cill03016]
    122310769
Enzymes [BR:cill01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     122310769
Transfer RNA biogenesis [BR:cill03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    122310769
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 122310769
NCBI-ProteinID: XP_042980837
LinkDB
Position
5:8446540..8451922
AA seq 689 aa
MDESPAETVVDPKLSVDDSPSLKSNGSQRTPEELVAKAIAPVKKEFLRSPPPRPSSSTNH
QNHVVSETKVVAVKDKKSKRQLKRERRQEQKSARSICPLIAKTGDVSSCPYNDKCRFSHD
LQGFKDQKPADLEGECPFMNAEGPCPYGLACRFFGTHKDGVPTETSDARKKCAEINGLKK
DVQKLLWKNKMSFPKADAKLKALGLLGKAKSKMKILEVEKDDGTVPSTCHETDENGCSEV
NNESDAKLDSVDVPEEDGVDGTLETDEQPPKKQKSVVYENFSSAEAKNGDVIFTEKNVGI
SCTQTKPEDCTDIIPPEADRSLKLHPREKKLIDFRDKLYLAPLTTVGNLPFRRVCKVLGA
DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARAIELIDQECTVDF
IDINMGCPIDIVVDKGAGSALLTKPMRIKNIIDAASGTVDKPITVKVRTGFFEGKNRIDT
LITDIGYWGTSAVTIHGRSRQQRYSKLANWDYIYQCARKAPDDLQVLGNGDVFSYLDWNM
HKTECPVLATCMIARGALIKPWIFTEIKEQKHWDISSGERLTILKDFVRFGLEHWGSDTK
GVETTRRFLLEWLSYTCRYIPVGLLDVVPQQLNWRPPTYMGRDDLETLMASDSAADWVRI
SEMLLGKVPDGFTFAPKHKSNAYDRAENG
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggacgagtctccggcggaaacagtcgtggacccgaagctctcagttgacgattctcca
tcgttgaaatcgaacggctcacaacgtaccccggaagaactcgtggccaaagctatagct
cccgtgaaaaaggagttccttcgttctccgccgcccagaccttcctcctctacaaatcat
caaaaccacgttgtttcggaaaccaaggttgttgccgtcaaggataagaagtcgaagcgc
cagctcaaacgtgaacgccgtcaggaacaaaaatctgcgcgaagtatctgtcctctgata
gcaaagactggagatgttagttcgtgtccatataatgataagtgtcgcttcagccacgac
ttacaaggctttaaggatcagaaaccggctgatctagagggagaatgtcctttcatgaat
gcagaagggccgtgcccctatggtttggcgtgtagattttttggtacacataaggatggt
gttcctactgaaacttcagatgctcggaagaaatgcgctgagatcaatggattaaaaaaa
gatgttcaaaaactcttgtggaaaaataaaatgagcttccctaaggcagatgctaaactc
aaagctcttgggctcctggggaaggcaaagtcaaaaatgaaaattctagaagttgagaag
gatgatggaactgttccaagtacttgtcatgagaccgatgaaaatggctgtagtgaagtt
aacaatgagtcagatgcaaaattagattctgttgatgtgcccgaagaggatggtgtggat
ggaacattagaaactgatgaacagcccccgaagaaacaaaaatctgtagtttatgaaaac
ttcagctccgctgaagccaaaaatggagatgtgattttcacagagaaaaatgttggtata
agctgtacacaaactaaaccagaagattgcactgatattataccaccagaagctgatagg
agcctgaaattacacccacgtgaaaagaagcttattgattttagagacaagttatatctt
gcacctctgaccactgttgggaatctgcctttccgaagggtttgtaaagtgttaggggcg
gatgtaacgtgcggtgaaatggcaatgtgtacaaatctcttgcagggtcaagcttcagaa
tgggcactgttgaggagacattcttctgaagacttatttggcgttcagatatgtggggca
tatccagacactgtggcacgcgccattgaacttattgatcaggaatgtacagtagacttt
attgatataaacatggggtgcccaattgatattgtagtggacaagggtgctggatcagct
cttcttacaaagcccatgcggataaaaaacattattgacgcagcttctggcacagtggac
aaacctataactgtcaaggtaagaactggtttttttgaagggaaaaaccgcattgacacg
ctaattacggacattggctactggggaactagtgcagtaaccatacatggtcgatcacga
cagcaacggtatagcaagcttgctaactgggactacatatatcagtgtgctagaaaggct
cctgatgatttgcaagtcctgggaaacggggatgttttctcgtacttagactggaacatg
cataagactgagtgtcctgtgcttgctacatgcatgattgcacgtggagcactaattaag
ccttggatatttaccgaaatcaaggaacaaaagcattgggacataagttctggggaacga
ttaactattttgaaagattttgtacgttttggccttgagcattggggctctgacacgaaa
ggagtggagacaactaggcgttttttattggaatggcttagctatacgtgccggtatata
cctgttggtcttttagatgtcgtccctcaacaactgaactggcgcccacccacctatatg
ggacgtgatgaccttgagacactaatggcctcagattcagcagcggactgggttcggata
tctgagatgttactcggcaaggttccagatggcttcacgtttgcaccgaagcataaatct
aatgcttatgaccgagcagaaaatggctga

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