Carya illinoinensis (pecan): 122310788
Help
Entry
122310788 CDS
T08745
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122310788
03036 Chromosome and associated proteins [BR:
cill03036
]
122310788
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
122310788
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Topoisomerases
122310788
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
122310788
Centrosome formation proteins
Centriole proteins
122310788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122310788
NCBI-ProteinID:
XP_042980861
LinkDB
All DBs
Position
5:complement(20071835..20078803)
Genome browser
AA seq
1496 aa
AA seq
DB search
MAIEKKRPLQTSNAANIDPAPTAGPTTAKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ
TLWIYESDRMVHRPVTFVPGLYKIFDEILVNAADNKQRDPKMDSLKVVIDVEGNCISVCN
NGDGVPVEVHQEEKVYVPELIFGHLLTSSNYDDTVKKTTGGRNGYGAKLTNIFSTEFVIE
TADGRRQKKYKQVFCNNMGKKSEPAISKCKESENWTKVTFKPDLAKFNMTHLEDDVVALM
KKRVIDMAGCLGKSVKVELNGSRVPVRAFTDYVNLYLDSAAKSEAEKPPSYHVKVNDRWE
VCVSLSDGQFQQVSFVNSIATTKGGTHVDYVTNQITTHVMNFVNKKNKSANVKAHNVKNY
LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSQDFLTKVTKSGIVESLLSWANFKQ
SKDLKKSDGTKTEKIHGIEKLDDANKAGGKESDKCTLILTEGDSAKALALAGLAAVGRDY
YGVFPLRGKLLNVREATNKQLTENKEIGHIKQILGLQQNKEYTSIKSLRYGHLMIMTDQD
HDGSHIKGLLINFIHSYWPSLLRVPSFLIEFITPIVKATHKNGTQLSFYTMPEYESWKES
LSGNAKGWSIKYYKGLGTSTSKEGREYFANLDKHRKDFIWVDQQDGDAIELAFSKKKIEE
RKNWLRRFEPGTHLDQTAKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC
SFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDYVGSNNINLLQPNGQFGT
RNYGGKDHASARYIYTRLSPITRFLFHKDDDDLLDYLNEDGQLIEPTWYMPIIPTVLVNG
SEGIGTGWSSYIPNYNPRDIIANLRRLLSGDALVPMDPWYRWFKGSIEKTAKEGGNGYIV
SGIIEEVNETTLKILELPVRRWTQDYKEFLESISSSNRECKDPLIEDFDMNCDDVIVEFD
IFLSEENFARARQEGLLKKFKLTTTISTSNMHLFDPKGVIKKYDTPEQILEEFFHLRLAF
YEKRKNFLLEKREMELLKLENKVRFILAVVNGEIIVSNRKRADLFVELQRKGFTPFPKKT
KAVEPEVAGAIDETEETEDNSPAVSKNGVVISDYEYLLAMAIGTLTIEKVQELCADKDRL
NKEVEDLRKETPRSFWMKDLYALEKQLDEIEKSDAQAEELRKKMRSKAKGQAPGKAGRQA
PKIQRKEKKKKANNADSVTENISTSATSAIEIEKAPEVVKPKGRAGSRKAPTKQERSTVV
LTDEDEDEDDEEVLELKERLAAYNLESSPDHSAAMETEVPKVPARKKEPSKRTAALKKPL
ATVSEISSDDEENEVDDEDVDLEVVAAPERGKKGGRKPAANAKAAKPPAAAKNRGAGNKQ
KPQTLSQKLISDMLKPAENSSGISPEKKVRKMRASPFNKKSASVLGRVGEANESTEPEEK
FGSASTSGSTEEMVEIVPARSRPLRVNRAQKRYVVSDSESENATEDSDFVEDQEED
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgaaaagaaacgccccttacagaccagcaatgccgccaacattgaccccgcc
cccaccgccggaccaaccactgccaaaaccatcgaagaaatgtaccagaagaagtcccag
ctcgagcacatcctcctccgacctgacacctacattggctccatcgagaagcacacccaa
accctctggatctacgagtccgatcgcatggtccaccgccccgtcaccttcgtccccggc
ctctacaagatcttcgacgagatcctcgtcaatgccgcagataacaagcaacgagaccca
aagatggactcgctcaaggttgtcattgacgtggagggcaactgcatcagcgtctgcaac
aatggtgatggtgtacccgtggaggttcaccaggaggagaaagtatacgttccggaactg
atcttcgggcacttgctgaccagcagtaactacgacgatacggtgaagaagaccaccggt
gggcgaaacggatacggtgccaagctcaccaacatcttctccactgagttcgtcatcgag
actgcagatgggagacgccagaagaagtacaagcaggtattctgtaacaacatgggaaag
aaatcagagccagccatatcaaagtgtaaagagagtgagaactggacgaaggtgacattt
aagcccgacttagcaaaatttaacatgacccatcttgaggacgatgtggttgcgctaatg
aaaaagcgggttattgacatggctggctgccttggaaagtctgtaaaggttgaattaaat
ggaagtagggtccctgtaagagcgtttactgactatgtgaatctatatttggattctgca
gctaaatccgaagctgagaaacctccaagctatcatgtgaaagttaacgataggtgggag
gtatgcgtgagtcttagtgacgggcagtttcaacaggtcagctttgtgaactcgattgcc
acgaccaagggcggtactcatgtggattatgtcactaaccaaattacaacccatgtgatg
aatttcgtaaataaaaagaacaagagtgccaatgtcaaagcgcataatgtgaaaaactac
ttgtgggtttttgtcaatgctctcattgacaaccctgcttttgattcccaaaccaaggaa
actctgacgcttcgtcaaagcagtttcgggtccaagtgtgagctatcacaggattttctt
actaaagtcacaaaatccggaattgtggagagtctcctgtcatgggcaaatttcaagcag
agcaaagaccttaagaaaagtgatggaacaaaaacagagaagattcatggaattgaaaag
ctggatgacgctaacaaagctgggggtaaggaatctgacaaatgtaccttgattttgacc
gaaggagattcggctaaggctcttgcattggccgggctcgctgctgtgggtcgagattac
tatggcgtgttcccgttgaggggtaaattgctcaatgtgagggaagccaccaataaacaa
ctcactgagaataaagaaatcgggcacatcaaacagattcttggacttcagcagaataaa
gaatataccagtatcaagtccctgagatatggtcacctgatgataatgactgatcaggat
cacgatggttcacacattaaagggctgttgatcaacttcattcattcttactggccatca
ctgttaagagttccatctttcttgattgagtttataactcctattgtgaaggcaactcat
aaaaatgggacacaattatcattttacactatgcctgagtacgagtcgtggaaggaaagt
ttgagtggcaatgcaaagggctggtctattaagtattataaggggctgggaacaagcaca
tcaaaggaagggagggagtactttgccaatcttgataaacataggaaagattttatatgg
gtagatcagcaagatggggatgccatcgagctagcattcagtaagaagaagatagaagag
aggaagaattggctcaggcgatttgagcctggtactcaccttgaccaaacggccaaactg
ataaagtacagtgactttgtcaacaaggagcttatattgttttcgatggcagatcttcaa
aggtctattccttcgatggttgacggcctgaaaccgggccaaaggaagattcttttctgc
tcttttaagaggaactttgtcaaggaagcaaaagtcgcccagttttctggttatgtgtct
gaacattcagcttatcatcatggcgagcagagccttgcgagtaccatcattggaatggca
caagactatgtgggcagcaacaacattaatcttcttcaaccgaatggccagtttggcacc
cgtaattatggagggaaagatcatgcaagtgctaggtacatatataccagactttctccc
atcacaaggtttctattccataaggatgatgatgaccttcttgactacttgaatgaagat
gggcaattgattgaaccgacttggtatatgccaattatacccacagttcttgtaaacggt
agtgaaggaattggaactggttggagctcttacattcctaattacaatccaagagacata
attgcaaatctaaggcgcttgttgagtggtgacgccttggtgcctatggatccatggtat
agatggtttaaaggaagtattgaaaagactgccaaggaaggtgggaatggttacattgtt
agtggaattatagaggaagtgaatgagacaactctcaagatattggagctgccagttcgt
cgttggacccaggattacaaagaatttctggagtctatttcttcaagtaatagagaatgc
aaggatcctttaatcgaggattttgacatgaattgcgatgacgtaatagtagaatttgac
atcttcttgagtgaagagaactttgctagggccaggcaagaaggtttgctgaagaaattc
aaactaactaccaccattagcacaagtaacatgcatctgtttgaccccaaaggcgtgata
aagaagtacgacaccccagaacaaattcttgaagaattttttcacctacgactcgcgttt
tatgagaaaagaaagaactttctgttggagaaacgggaaatggagttgttgaagttggaa
aacaaggttaggtttatacttgcagttgtgaatggagagatcattgtgagcaacagaaag
agagctgatctgtttgttgagctgcaaagaaaaggtttcactccatttcccaagaaaact
aaagctgtagagccagaggttgctggagcaattgatgaaacagaagaaacagaagacaac
tctcctgctgttagcaagaatggagtagtgatcagtgattacgagtatctactagccatg
gcaattggaaccttgaccattgagaaggttcaggagctatgtgctgacaaggataggctc
aataaggaggtcgaagatttgagaaaagaaaccccaaggtccttttggatgaaagatctg
tatgctctagagaagcaactcgatgagattgaaaaaagtgatgctcaggcagaggagctg
agaaagaaaatgagaagcaaggcaaagggtcaagcgcctggtaaggctggtagacaagcg
cccaagatccaacgcaaggagaaaaagaaaaaggcaaataacgcagactcagttactgaa
aacatctcaacatcggctacatctgcaattgaaattgaaaaagctcctgaggtggtgaaa
cccaaggggagagcgggctctaggaaggctcctaccaagcaggaaaggtccactgtagtc
ttgactgatgaggatgaggatgaggatgacgaggaagtgctggagctcaaagaacgactt
gctgcctataaccttgaatcatctcctgatcattcagcagccatggagacggaagtgcca
aaagtcccagccaggaagaaagaacctagcaagaggactgctgcgctgaagaagcctttg
gcaactgtttcagagatatcttcagatgatgaagagaatgaggtggatgacgaagacgtt
gatctagaagttgtagctgccccagaaaggggaaagaagggaggtagaaaaccagctgca
aatgccaaggctgctaagccccctgcagcagcaaagaacagaggtgcaggcaacaaacag
aaacctcaaacgctgagccagaagcttatatctgacatgttaaagcctgctgaaaattca
tctgggatttcaccggaaaagaaagtgagaaagatgagggcatctccattcaacaagaaa
agtgcttccgtgttgggcagagttggtgaggcaaatgagtccactgaacccgaagaaaaa
tttggttctgcttctacttctggcagtaccgaagaaatggttgaaattgtgccagcaaga
tcaagacctctgagggtgaaccgcgcgcagaaaaggtatgtggtgagtgactctgaaagt
gagaatgccactgaggattctgactttgttgaagatcaagaggaagattag
DBGET
integrated database retrieval system
