Carya illinoinensis (pecan): 122310898
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Entry
122310898 CDS
T08745
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122310898
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122310898
NCBI-ProteinID:
XP_042981070
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Position
5:1623788..1626392
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AA seq
599 aa
AA seq
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MAVDSAISSPLGPPACKKDAKALQFIEEMTRNADAVQERILAEILSRNAETEYLKRFKLN
GATDRKIFKSHIPMVTYEDLQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPT
IQEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPSGLLARPVLTSYYKSE
HFKTRPYDPYNVYTSPDEAILCADSFQSMYTQMLCGLIERKQVLRLGAVFASGLLRAIRF
LQLNWNQLAHDIRTGTLSPKITEPAIKDRMVPILKPNPQLADFITRKCSEDNWEGILTKI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMSKPSEVSYTI
MPNMAYFEFLPHEPNANRSSTRDLPLKLVDLVDVEVGKEYELVITTYAGLCRYRVGDILR
VTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAMENASQLLKEFNTSVVEYTSYADT
KTIPGHYVIYWELLVKDPDNSPSEEVLNRCCLEMEQSLNSVYRQGRVADNSIGPLEIRVV
KNGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSAHFSPSLPHWTPQRRR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgattctgctatctcatcgccgcttggccccccggcctgcaagaaggacgcc
aaggcgctccaattcattgaggaaatgacgaggaatgccgacgcggttcaagagagaatc
ttggccgagatcttgagcagaaacgccgagaccgaatacctcaagcgctttaaacttaat
ggcgcaactgaccgcaaaattttcaaatcccacatccccatggttacctacgaggatctt
cagcctgaaatccaacgtatcgctaatggcgaccgttctcctattctctcagctcacccc
atttccgagttcctcaccagttctgggacttccgctggagaaagaaaactcatgcccacg
attcaggaagagctggatcgtcgccagctactatacagcctcctcatgccagtcatgaac
ctttatgtgccgggtttggacaagggtaaagggctatacttcttgttcgtaaaatcggag
acgaggacaccgagtggcctcttggcccgcccagtgctaacgagctactacaagagcgaa
cactttaagactcgaccctacgacccgtacaacgtctacacgagccccgacgaggccatc
ctttgcgccgactcgttccaaagcatgtacacccaaatgctctgtggcctcatagagcgc
aagcaagtcctccgcctcggtgccgtctttgcctctggcctcctccgggccatcaggttc
ctgcagctcaattggaaccaactagcccatgacattcgaacaggcaccctcagcccgaaa
atcaccgagccagcaatcaaagaccgtatggttcctatcctaaagccaaacccgcaattg
gcagatttcattaccagaaaatgctcggaagacaattgggagggcattttaaccaaaatt
tggcccaacacgaagtatttggacgtaattgtaaccggtgctatggcgcagtatatacct
acgctagattactatagcggaggattgcctctcgcgtgtacaatgtacgcgtcatcggag
tgctatttcggacttaatctcaacccaatgtccaaaccatccgaagtgtcttacaccata
atgccaaatatggcctacttcgagttcctaccccacgagcccaatgccaacaggtccagt
acccgtgacttgcctttgaaactcgttgatcttgtggacgtggaagtcgggaaggagtat
gagctagtgatcactacctacgccgggctttgcaggtacagagtcggagacattcttcgc
gtcaccggcttccacaactcggccccacagttccacttcgtgaggaggaagaacgtgttg
ctcagcatcgactcagacaagaccgacgaggcggagttgcaaaaggccatggagaacgcc
tctcagctcctcaaggagttcaacaccagcgtagtcgagtacacgagctacgccgacacg
aaaacgatcccgggtcactacgtgatatattgggagctcttggtgaaggaccctgacaac
tcgccgagtgaggaggtactgaatcgatgttgtttggagatggagcaatctctcaactcg
gtgtaccgacaaggccgagtggcggacaactcgattgggccgctggaaatacgcgtggta
aagaacgggacgtttgaggaactcatggattatgcaatctcgaggggcgcgtccattaat
cagtataaggtgccgagatgtgtgaattttactccgattatggagcttttggactccagg
gtggtctcggcacatttcagcccaagtttgccacattggaccccgcaaaggagacggtaa
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