Carya illinoinensis (pecan): 122311151
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Entry
122311151 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122311151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122311151
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122311151
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
IQ
Motif
Other DBs
NCBI-GeneID:
122311151
NCBI-ProteinID:
XP_042981519
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Position
1:13299170..13305457
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AA seq
768 aa
AA seq
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MGSRRNNFVRFPSWSSEKSSSFEHQHSMNDRKFSRNSSRATFDRFFESFLKGFGRGSETI
RGLKNNPTSIPSVDHDQPRKDHSGSKKTKIFDPQDQFLQTWNKIFVLSCMVSVALDPLFF
YTPVFKVDEEKKCLDCDSDKTLAIIASVLRSVTDVFYAIHIYFQFRTGIIPPSSRHVFGR
AELIDDPMAIAKRYLSSYFIIDILAIVPCPQVVVLWPRKSKMPWLTKEMLKSVIFSQYVP
RLLRIYPLYVEVTRTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFGIERQASCWKQM
CRNITATGCQDHSYYCSDDKRNSTERGYWGNITLDCRIVEPDDKNETSTTDPFDYGIFTK
VLKSGVVAESNITRKVSYCFWWGLRSLSSLGQNLDTSTYFWEIVFAVSIAIAGLVLFSLL
IGNMQRYLQSTTVRVEEMRVRKTDAEQWMSQRMLPNNLRQRVRRYEQYKWLETRGVEEEN
LIRNLPKDLRRDIKRHLCLDLLKKVPMFEKMDQQLWDPLVDRLKPVLYTQDSYIVREGDP
VDEMLFIMRGNLATFTTNGGTTGFFNTADLKAGDFCGEELLTWALYPQSSTKFPISTRTV
EAKTEVQAFALMAEDLKTVASQFRKLHCKELQHTFKFYSQQWRTWAACFIQSAWRRYSKK
NHERALRDAENRLQFSLANEAGTSASLGATIYATRFAAHLLRAVRRPNGGRTTTRAPQKV
LQLLPPKPAEPDFSAEVPLPAGCSGNVRFTPSNWKSTHQPPILFYIKP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaggcgaaataattttgtgaggtttccaagttggagttcggagaaatcttcc
agttttgagcatcaacattccatgaacgatcgaaaattttcaagaaacagttctagagcc
acatttgacagattttttgagagttttctgaaaggatttgggagagggtcagagacaatt
agaggtttgaaaaacaacccaacaagcatcccttctgtagatcatgatcagccacgaaaa
gatcactcaggttctaagaaaactaaaatctttgaccctcaggatcaatttcttcaaaca
tggaacaaaatatttgttctctcttgtatggtgtcagtggcattggacccactcttcttt
tacaccccagtttttaaggtggatgaggagaagaaatgcttagactgtgactcggacaaa
actttggcgattattgcttctgttcttcgttcagtcacagatgttttttatgcaattcat
atatacttccagtttcgaactgggattatcccaccttcttctcgtcatgtgtttggaagg
gcagagttgattgatgatcctatggcaatcgcaaaaagatatttgtcctcatacttcatt
atcgacattctggcaatcgttccctgcccacaggtggtggtactttggccgcgaaaaagt
aaaatgccatggttgacgaaggaaatgttgaagtcagtaatcttctcccaatatgtgccg
aggcttttgcggatctacccactatatgtagaagtaactaggacctctggcattctgact
gagacagcatgggctggagctgcttataatcttttcctctacatgctagctagtcacgta
gttggagccttttggtacttgtttggcatagaacgacaggcttcttgctggaaacaaatg
tgcaggaacattacagctaccggttgtcaagatcacagttattactgcagtgatgataaa
cggaatagtactgaacgtggctactggggtaatattactctggattgtcgtattgtcgaa
ccagacgataaaaacgaaacctcaactactgatccgttcgactatggaatatttactaaa
gttttgaagtctggagtggtggccgaatcaaatattacaaggaaagtgtcttactgcttc
tggtggggtttgcgtagtctgagttctcttggccaaaacttggatacgagtacatatttc
tgggagatagtctttgctgtttccatagccatcgctgggttggtcttattctcattactt
ataggcaatatgcagagatatttgcaatccacaacagtgagagtagaagaaatgagagtg
agaaagactgatgccgaacagtggatgtcccaacgtatgctccctaacaacttaaggcag
cgggttagacgatatgaacagtacaagtggctagaaacaagaggtgtggaggaagagaat
ctcatccgtaaccttcctaaggatctcagaagggacataaagcgccatctttgcctcgat
cttcttaagaaggtgcccatgttcgaaaagatggatcaacaactatgggatccattggtt
gatcgcctcaaaccagtgctttacacacaagacagctacattgttcgtgaaggggatcca
gtggacgagatgctctttatcatgcgaggaaatctagccactttcactaccaatggtgga
acaactggttttttcaacaccgctgaccttaaagccggcgacttttgtggagaagagctt
cttacttgggccctatatccccagtcctcgaccaaattcccaatttcaacaagaacagtg
gaggcaaaaacagaggttcaagcctttgctctaatggccgaggatttgaagactgtggct
tctcagtttcggaaacttcactgcaaggagttgcagcacactttcaagttctactcccaa
caatggagaacatgggcggcctgttttatccaatcagcttggcgccgctactctaagaaa
aaccatgagagggctttgcgtgatgctgaaaatagactgcaattttctttggcaaatgaa
gctgggacctcggcaagtcttggtgcaactatttatgcaacaaggtttgctgctcattta
cttcgagccgtgcgacgaccaaacggtggacgcaccactaccagagcgccacaaaaagtg
ctacagctactaccaccgaagcctgctgagccagatttcagtgctgaagtccctcttcca
gctggatgcagcggaaatgtgagatttacaccgtccaattggaagtcgacacatcaacca
cctattttgttttacattaaaccttga
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