Carya illinoinensis (pecan): 122311172
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Entry
122311172 CDS
T08745
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122311172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cill03051
]
122311172
Proteasome [BR:
cill03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122311172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
nSTAND3
PRS7_OB
DUF815
TIP49
Prot_ATP_ID_OB_N
AAA_7
Parvo_NS1
AAA_14
RNA_helicase
AAA_33
Mg_chelatase
AAA_18
Sigma54_activat
AAA_3
AAA_24
IstB_IS21
AAA_28
AAA_lid_PRS2_C
NACHT
TsaE
NPHP3_N
ABC_tran
AAA_25
bpMoxR
ATPase
ATPase_2
PhoH
AAA_11
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
122311172
NCBI-ProteinID:
XP_042981542
LinkDB
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Position
5:complement(8019502..8026415)
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AA seq
399 aa
AA seq
DB search
MSSESEETVRRRTALADHRKKLLSHKELESRVRLVRENLRAAKKEFGKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgagtcagaggaaaccgtgcgacgtcgtacagcgctcgccgatcaccgtaaa
aaactcctctcccataaggagctcgaatccagagtccgcttagtgagagagaacttgagg
gctgcaaaaaaggaattcggtaaaactgaagacgatctcaagtcccttcaaagtgttggc
cagatcataggcgaagttctcaggcctcttgacaatgaacgcttgatagtaaaagcaagc
agtggaccaaggtatgttgttggctgtcgtagcaaggtcgacaaggaaaaactaacttca
ggaactcgagtggtgcttgatatgactactttgacaatcatgcgagcacttcctcgtgaa
gttgatcccgttgtatataatatgcttcatgaagacccaggcaatgttagctactcagca
gtgggagggctgtcagatcagattcgagaacttagggaatccatagaactgcctctaatg
aatcctgagctctttattagggtgggaatcaaacctcccaagggtgttcttctctacgga
cctcctggtacgggaaagacattattagccagagcaattgcaagcaacattgatgccaat
ttcttgaagatagtatcaagtgcaataattgataaatacataggtgagagtgcaagattg
atacgggaaatgtttggttatgcacgtgatcaccaaccatgcatcatatttatggatgag
atagatgccattggtggacgtcgtttcagcgagggaacaagtgctgatcgtgaaattcag
aggacactcatggagttgcttaatcagctagatggtttcgaccagcttgggaaggttaaa
atgatcatggccacaaacagaccagatgtgctggaccctgcacttcttcgtcccggacga
ctggaccggaaaattgaaattcctttacctaacgaacagtccagaatggaaatcctcaaa
atccatgctgctggaattgccaaacatggtgacattgactatgaagcagttgtaaagctt
gctgaggggttcaatggtgctgatcttcgtaatgtttgcactgaggctgggatgtctgct
atccgggcagaacgcgattatgtcatccatgaagatttcatgaaggctgtccggaagctg
aacgaagcaaagaaactcgaatcaagcgctcactacagtgctgattttgggaaggactga
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