Carya illinoinensis (pecan): 122311223
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Entry
122311223 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122311223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122311223
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122311223
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
122311223
NCBI-ProteinID:
XP_042981612
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Position
1:13381807..13390952
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AA seq
668 aa
AA seq
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MCSNYTPPALTLGLTQHDPQDQFVQTWNKIFVLSCVVSVALDPLFFYTPVLKVYEEEQCL
SFGSDKTLEIIASVLRSVTDAFYAIHIYFQFRTGIIPPSSRHHVFGWGELIVDPKAIAKR
YLSTYFIIDILAILPCPQVVVLLASKKETPMVTKELLKLVIFSQYVPRLLRIYPQYVEVI
RTSGILIRTAWTGAAYNLFLYMLASHVVGAFWYLFGTERQASCWKKMCSNITGCPDKGFY
CRDDNQSSERGYLHNISRFCRIVEPYDQKGNSTNEAFDYGIFTKVLKSGVVESKNFLDKS
SYCFWWGLRSLSSLGQNLDTSTYFWEIVFAVSIAIAGLVLFSLLIGNMQKYLQSLQSTIV
KIEEMRKRKTDVEQWEQWMSQRMLPENLRKRVRRYEQYKWLETRGVDEENLFRNLPKDLR
RDIKRYLCLDLLKKVPMFAKMDQQLWDPLVDRLKPVLYTQFSYIVREGDPVDEMLFIMRG
NLTTFTTNGGIIGFFNTAILKAGDFCGEELLTWVLFDQSSTTFPLSTRTVKVNTEVQAFA
LMAEDLKTVASQFLKLHTKELQNTFKFYSQQWRTWAACFIQSAWHCYSKKKHERTLRDAE
NRLQFSLANEAGTSASLGATIYALWFAAHLLRALRRPNGGRTSTRAPQRVPELMPPKPAE
PDFSANQG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcaactatacaccacctgcactcacacttgggttgactcaacatgaccctcag
gatcaatttgttcaaacatggaacaaaatatttgtgctttcttgtgtggtatcagtggct
ttggacccactcttcttttacaccccagttttgaaggtgtatgaggaggagcaatgctta
agctttggatcggacaaaactctggagattattgcttctgttcttcgttcagtcacagat
gctttttatgcaatacatatatactttcagtttcgaactgggattatcccaccttcatct
cgtcatcatgtgtttggatggggagagttgattgttgatcctaaggcaatcgcaaagaga
tatctgtccacatacttcattatcgacattctggcaatccttccctgcccacaggtggta
gtacttttagcgtcgaaaaaggaaacgccaatggtgacgaaggaattgttgaagttagta
atcttctcccaatatgtgccgaggcttttacggatctacccgcaatatgtagaagtaatt
aggacctctggcattctgattcggacagcatggactggagctgcttataatcttttcctc
tacatgctagctagtcacgtagttggagccttttggtacttgtttggcacagaaagacag
gcttcctgctggaaaaaaatgtgcagtaacattacaggttgtccagataaaggtttttac
tgccgtgatgataaccagagtagtgaacgtggctatttgcataatattagtcggttttgc
cgtattgtcgaaccatatgatcagaagggaaactcaactaatgaggccttcgactatgga
atatttactaaagttttgaagtctggagtggtggaatcaaaaaactttttagacaaatct
tcttactgcttttggtggggattgcgtagtctgagttctcttggccaaaacttggataca
agtacatatttctgggagatagtctttgctgtttccatagccatcgctgggttggtctta
ttctcattacttataggcaatatgcagaaatatctgcaatccctgcaatccacaatagtg
aaaatagaagaaatgagaaaaaggaagactgatgttgaacagtgggaacagtggatgtcc
caacgtatgctccctgaaaacttaaggaagcgggttagacgatatgaacagtacaagtgg
ctagaaacaagaggtgtggatgaagagaatctcttccgtaaccttcctaaggatctcaga
agggacataaagcgctatctttgccttgatcttcttaagaaggtacccatgttcgcaaag
atggatcaacaactatgggatccgctggttgatcgtctcaagccagtactttacacacaa
ttcagctacattgttcgtgaaggggatccagtggacgagatgctctttatcatgcgagga
aatctaaccactttcactaccaatggtggaataattggttttttcaacactgctattctt
aaagccggtgacttttgtggagaagagcttcttacttgggtcctatttgaccagtcctcg
accacattccccctttcaacaagaacagtgaaggtaaatacagaggttcaagcctttgct
ctaatggcggaggatttgaagactgtggcttctcagtttctgaaacttcacaccaaggag
ttgcagaacactttcaagttctactcccaacaatggagaacatgggcggcctgttttatc
caatcagcttggcattgctactctaagaagaaacatgagaggactttgcgtgatgctgaa
aatagactgcaattttctttggcaaatgaagctgggacctcggcaagtctcggtgcaact
atttatgcattatggtttgctgcccatttacttcgagccttgcgacgaccaaacggtgga
cgcaccagtaccagagcgccacaaagagtgccagagctaatgccaccgaagcctgctgag
ccagatttcagtgctaatcaaggttaa
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