KEGG   Carya illinoinensis (pecan): 122311243
Entry
122311243         CDS       T08745                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03013  Nucleocytoplasmic transport
cill03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122311243
   03015 mRNA surveillance pathway
    122311243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122311243
   03041 Spliceosome [BR:cill03041]
    122311243
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122311243
Spliceosome [BR:cill03041]
 Complex C
  Other components
   EJC/TREX
    122311243
SSDB
Motif
Pfam: Pinin_SDK_memA MIIP
Other DBs
NCBI-GeneID: 122311243
NCBI-ProteinID: XP_042981644
LinkDB
Position
5:complement(4398013..4402358)
AA seq 426 aa
MGSTEAAGKTEEELRKEIDELLRQQRQITERLRDPRGLRRGGFSGPGPRNFAANGARQRG
FIRPADRIEVEDQPPGKRRLSSAVVKLEDGEINEDAEAAKDLKEEDAIGEGTAGAGTANL
SDKKPLNFQQGGWSRRDGYQRAVKTESEGPVVEHIPRVLPKNEDPSLVNRNKRMLGQLLG
TLEKFRKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRQQEREQLAEKRRRDLTLRAR
VAAKTEEKKLELLFLQWSDHHKKLCNFIRTKAEPPIYYLPKKPLEEDETLVLQRKEQAFL
EWKAARREELSEYQKEIQEQYIANVEKDLERWQNARKARKTNNDMLNLQETMDKELDTHR
LEHGPKKRKIPDGNNNEDEDDVEDINVGEDDMMDDVLDVDDASRRGDETVRPEAGNTSPH
AETNDQ
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgggaagcactgaagctgcgggcaaaacggaggaggagctccgtaaagagatcgatgag
ctcttacgccagcaacgccaaattaccgagcggcttcgagatcctcggggactccgtagg
ggaggcttttccggccccggccctcgtaatttcgccgccaacggagctcgtcagcgaggt
tttattcgacccgcagatagaattgaagtggaagatcaacctccaggaaaaaggcgtcta
tcttcggccgttgtgaagctggaggatggggagatcaatgaagatgcggaagcagcaaag
gatttgaaggaggaggatgcaattggggagggaactgctggagctggcactgctaatctg
agcgataaaaagccattgaattttcagcagggtggctggtctaggagggatggataccaa
agagcagtgaagactgaatctgaaggaccagtggtggagcatattccgagggtattgccg
aagaatgaggatccaagcttggttaataggaacaaaagaatgctcgggcagcttttggga
actctagagaaattcaggaaagaagatatgcaactctcaggaacagaggcgtatatgcga
aggtcgaattctctacaaagagctgagcaacgagcacgtgaagaaagtgagaggctgagg
caacaagagcgtgagcaattggcagaaaaacgacggagagatctgactctcagggctcgt
gttgctgccaagacagaagaaaagaagttagaactgctgtttcttcagtggagtgatcac
cataaaaaactttgcaattttataaggaccaaggcagagcctccaatatattatttaccc
aaaaagcctttagaagaagacgaaaccttggttctgcagcgtaaagaacaggcatttctg
gagtggaaggctgctaggagggaggaactgtctgaataccaaaaagaaattcaggagcag
tatattgccaatgtagaaaaggatttagagagatggcaaaatgcaaggaaagcaaggaaa
accaacaatgatatgttgaacttacaggaaacaatggacaaagaattggatacacatagg
cttgagcatggtcccaagaaaagaaagattcctgatggtaacaacaacgaagatgaggat
gatgtggaagatatcaatgtcggggaggatgatatgatggatgatgtactggatgttgat
gacgctagcaggaggggcgatgaaacggtcaggccagaggcaggtaatacaagtccacat
gctgaaactaatgatcagtag

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