Carya illinoinensis (pecan): 122311243
Help
Entry
122311243 CDS
T08745
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122311243
03015 mRNA surveillance pathway
122311243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122311243
03041 Spliceosome [BR:
cill03041
]
122311243
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122311243
Spliceosome [BR:
cill03041
]
Complex C
Other components
EJC/TREX
122311243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
MIIP
Motif
Other DBs
NCBI-GeneID:
122311243
NCBI-ProteinID:
XP_042981644
LinkDB
All DBs
Position
5:complement(4398013..4402358)
Genome browser
AA seq
426 aa
AA seq
DB search
MGSTEAAGKTEEELRKEIDELLRQQRQITERLRDPRGLRRGGFSGPGPRNFAANGARQRG
FIRPADRIEVEDQPPGKRRLSSAVVKLEDGEINEDAEAAKDLKEEDAIGEGTAGAGTANL
SDKKPLNFQQGGWSRRDGYQRAVKTESEGPVVEHIPRVLPKNEDPSLVNRNKRMLGQLLG
TLEKFRKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRQQEREQLAEKRRRDLTLRAR
VAAKTEEKKLELLFLQWSDHHKKLCNFIRTKAEPPIYYLPKKPLEEDETLVLQRKEQAFL
EWKAARREELSEYQKEIQEQYIANVEKDLERWQNARKARKTNNDMLNLQETMDKELDTHR
LEHGPKKRKIPDGNNNEDEDDVEDINVGEDDMMDDVLDVDDASRRGDETVRPEAGNTSPH
AETNDQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcactgaagctgcgggcaaaacggaggaggagctccgtaaagagatcgatgag
ctcttacgccagcaacgccaaattaccgagcggcttcgagatcctcggggactccgtagg
ggaggcttttccggccccggccctcgtaatttcgccgccaacggagctcgtcagcgaggt
tttattcgacccgcagatagaattgaagtggaagatcaacctccaggaaaaaggcgtcta
tcttcggccgttgtgaagctggaggatggggagatcaatgaagatgcggaagcagcaaag
gatttgaaggaggaggatgcaattggggagggaactgctggagctggcactgctaatctg
agcgataaaaagccattgaattttcagcagggtggctggtctaggagggatggataccaa
agagcagtgaagactgaatctgaaggaccagtggtggagcatattccgagggtattgccg
aagaatgaggatccaagcttggttaataggaacaaaagaatgctcgggcagcttttggga
actctagagaaattcaggaaagaagatatgcaactctcaggaacagaggcgtatatgcga
aggtcgaattctctacaaagagctgagcaacgagcacgtgaagaaagtgagaggctgagg
caacaagagcgtgagcaattggcagaaaaacgacggagagatctgactctcagggctcgt
gttgctgccaagacagaagaaaagaagttagaactgctgtttcttcagtggagtgatcac
cataaaaaactttgcaattttataaggaccaaggcagagcctccaatatattatttaccc
aaaaagcctttagaagaagacgaaaccttggttctgcagcgtaaagaacaggcatttctg
gagtggaaggctgctaggagggaggaactgtctgaataccaaaaagaaattcaggagcag
tatattgccaatgtagaaaaggatttagagagatggcaaaatgcaaggaaagcaaggaaa
accaacaatgatatgttgaacttacaggaaacaatggacaaagaattggatacacatagg
cttgagcatggtcccaagaaaagaaagattcctgatggtaacaacaacgaagatgaggat
gatgtggaagatatcaatgtcggggaggatgatatgatggatgatgtactggatgttgat
gacgctagcaggaggggcgatgaaacggtcaggccagaggcaggtaatacaagtccacat
gctgaaactaatgatcagtag
DBGET
integrated database retrieval system