KEGG   Carya illinoinensis (pecan): 122311381
Entry
122311381         CDS       T08745                                 
Name
(RefSeq) notchless protein homolog
  KO
K14855  ribosome assembly protein 4
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cill03009]
    122311381
Ribosome biogenesis [BR:cill03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    122311381
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 DSE1_N Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR19_1st ASA1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st CFAP251_N Beta-prop_DCAF12 Beta-prop_DCAF4 NLE Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_VPS8 WD40_RFWD3 Tricorn_2nd eIF2A Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_SPT8 PD40 Beta-prop_NUP159_NUP214 Tricorn_N PAC11 RMC1_N WDR54 Ge1_WD40 Beta-prop_Vps41 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 122311381
NCBI-ProteinID: XP_042981859
LinkDB
Position
5:complement(2641996..2649901)
AA seq 477 aa
MEVEEEQRETMTNKVMCLLTDPGGTPLGAAMYLPQNAGPQQLQQMVNKLLSNEEKLPYAF
YISDQELLVPLGTYLEKNKFSVEKVLSIVYQPQAIFRIRPVNRCSSTISGHTEAVLSVAF
SPDGKHLASGSGDTTVRLWDLNTQTPLFTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQC
WDPQTGKPSGNPLIGHKKWITGISWEPAHLNAPCRRFVSASKDGDARIWDVSLRKCIISL
SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIKELKGHGHWVNSLALSTEYVLR
TGAFDHTSKHYSSPKEMKKVALERYNKMKGNGPERLVSGSDDFTMFLWEPSVSKHPKTRM
TGHQQLVNHVYFSPDGQWVASASFDKSVKLWNGTTGKFVAAFRGHVGPVYQISWSADSRL
LLSGSKDSTLKVWDIRTHKLKQDLPGHADEVYAVDWSPDGEKVASGGKDRVLKLWMG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggaggtggaagaagagcagagagaaacgatgaccaacaaagtgatgtgccttttgaca
gatccaggtggaacgcctctgggagctgccatgtacctaccccaaaatgctgggccccaa
cagctccagcaaatggtcaacaagcttctcagcaatgaggagaagttgccttatgctttc
tatatatcagatcaggagcttctcgtgccacttggcacttatttggagaagaataaattt
tctgtggagaaggtgctctcaatagtttatcaaccacaagctatattcagaattcgccca
gttaatcgttgctcgtccacaatttctggtcacaccgaagccgtactttcagttgccttt
agtcctgatgggaaacatttggcaagtggttcaggcgataccactgtcagactttgggac
ctcaatacccagacaccgctgtttacatgtacaggacacaagaattgggttctttgtatt
gcatggtcaccagacggtaagcatcttgtaagtgggagcaaggcaggagaacttcaatgc
tgggaccctcaaacagggaagccatcaggcaatccacttattggccacaaaaaatggatt
actggtatctcttgggaaccggcccatctgaatgctccatgtcggcggtttgtaagcgct
agtaaagatggtgatgcacgcatttgggacgtttcattaaggaaatgcattatttctctt
agtggtcacacactagcagtaacttgtgtgaaatggggtggagatggagtaatttataca
ggctcccaggattgtaccatcaaagtttgggaaactacccaagggaagctaattaaagaa
ttgaagggtcatgggcattgggtcaactctcttgcattgagcactgaatatgttcttcgc
actggggcttttgaccatacgagcaagcactattcatcaccaaaggaaatgaaaaaggtt
gctttggaaaggtataacaaaatgaaaggcaatggccctgaaagattggtttctggatcg
gatgattttaccatgtttctttgggaaccttctgtcagcaagcaccctaaaactcgcatg
acaggtcatcaacagcttgtcaatcatgtttatttttcacctgatggacaatgggttgca
agtgcctcatttgacaagtctgtcaagttatggaatggtactacagggaaattcgtcgct
gcttttcgaggccatgttgggcctgtttatcagatcagctggtctgcagacagtaggctt
cttttgagtggcagcaaggattccacactcaaggtttgggatatccggacacacaagttg
aaacaagaccttccaggccatgcagatgaggtttatgctgttgattggagtccagatggt
gaaaaggtagcttcaggtggtaaagatagagtattgaagttatggatgggttag

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