Carya illinoinensis (pecan): 122311529
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Entry
122311529 CDS
T08745
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122311529
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122311529
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122311529
NCBI-ProteinID:
XP_042982052
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Position
5:complement(17177149..17179500)
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AA seq
440 aa
AA seq
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MTEANKNVFQILFFVSFAIVVPSLHATNISQWDGYWKHRADEALKANLAAYDPHPEKITE
DLNFRVNKVLTGSNSTRRNLKKNTGPCTATNPIDRCWRCDPDWAKNRKKLADCVLGFGRN
TFGGKYGPYYVVTDSSDDDLVNPKPGTLRHAVIQKGPLWIIFASSMVIRLHEELIMTSDK
TIDARGANVRIAHGAGITIQFIKNVIIHNLHIHNIYAGSGGLIVDSVDHFGIRTPSDGDG
ISIFGSSNVWIDHVSMSQCKDGLIDAIMGSTGITISNSHFTNHNEVMLFGASDSYSGDEI
MQITVAFNHFGRGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSSHPTIISQGNRFIAPP
DLAAKEVTKREYTTGSECSSWTWRSEGDLMMNGAFFVQSGKKLKKKSFSRLDMIKSKPGT
YVRRLTRHSGSLNCQPGKPC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctaacaaaaatgtttttcagatcttgttttttgtgtcattcgctattgtt
gttccaagccttcatgccaccaacatcagtcaatgggatggttattggaagcaccgtgct
gacgaggccctaaaggctaacctcgcagcttatgatccacatcctgagaaaatcaccgag
gacttgaactttcgagtcaacaaggttttgacagggagcaatagcacaagaagaaacttg
aagaagaacacaggcccatgcacagccaccaaccccattgaccgatgctggaggtgtgac
cccgactgggccaaaaaccgaaagaagctagctgactgcgtccttggctttggccgtaac
acctttggtggaaaatatggtccttattatgttgtgactgattcctcagatgatgacctg
gtgaatcccaaacccggaaccctccgccatgccgttatccaaaaagggcccctctggatc
atctttgcaagcagcatggttattaggctccatgaagagttgatcatgaccagtgacaaa
accattgatgcaagaggagccaatgtgcgcatcgctcatggcgctggaatcaccatacaa
tttatcaagaatgtgatcatccataacctccatatccataatatttacgccggtagtggc
ggactcatcgtagactctgttgaccatttcggtattaggactcctagtgatggtgatggt
atctccatctttggctcatccaacgtctggattgaccatgtttccatgtcccagtgcaaa
gatggcctcatcgatgccatcatgggatcaactggtattaccatctccaacagccatttc
accaatcacaatgaggtgatgttgttcggagcaagcgacagctactccggagacgagata
atgcaaatcacagtcgccttcaaccacttcggtaggggattggtgcagaggatgccgagg
tgccgatggggattcattcatgtggttaataatgactatacgcactggctcatgtatgcc
attggcggtagcagccatcctactattatcagtcagggtaatcgattcattgctcctcca
gacttggctgctaaagaggtgaccaagagggaatatacaactgggagcgagtgtagttca
tggacatggagatccgagggagatctgatgatgaatggagcattcttcgttcaatcaggg
aaaaaactgaaaaagaagtcattctccaggctggatatgatcaaatcgaaaccagggaca
tatgtgaggagactcacacgccactccggttcgcttaactgccaaccaggaaaaccttgt
taa
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