Carya illinoinensis (pecan): 122311578
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Entry
122311578 CDS
T08745
Name
(RefSeq) serine/arginine-rich splicing factor RS31A-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122311578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122311578
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
SR proteins
122311578
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122311578
NCBI-ProteinID:
XP_042982111
LinkDB
All DBs
Position
1:complement(14572770..14575835)
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AA seq
285 aa
AA seq
DB search
MAPPSARTHENPILSSRALFLFETNRRILKVATMRPVFVGNFEYDTRQSELERLFGKYGK
IERVDMKSGFAFVYFMDERDAEDAIRGVDNRPFGYDRRRLSVEWARGERGRPRDGSRSVA
NQRPTKTLFIINFDPIRTTVRDIERHFEPYGRILHVRIRRNFAFVQFETQEDATKALECT
HMSKLLDRVVSVEYALRDDDERGDSYYDSPRKRGYGGRGVSPYRRSPSPAYHRRRSPDYG
RPGSPVYDRYNGPAYDRRRSPDYGRNRSPEYGRNRSRSPIRRSRT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcccctccaagtgccagaacacacgaaaaccctattctctcttctagggctttgttt
ctctttgagacgaatcgaaggattttgaaggttgcgacgatgaggccggttttcgtgggt
aacttcgagtacgatactcgccaatctgaactggagcgtttgtttggaaaatacgggaag
atcgagcgtgtggacatgaaatctggttttgcttttgtttatttcatggatgagcgtgat
gctgaagatgccattcgtggtgttgataataggccatttggttatgacaggcgtaggttg
tcagtggagtgggctaggggggaacgcggtcggcctcgtgatggatctaggtccgtggca
aaccaaaggcctactaaaaccttgttcataattaactttgatccaattcgcacaactgtg
cgtgatatagaaaggcactttgaaccttatggaaggattcttcatgttcgaattcgacgg
aactttgcatttgttcagtttgagactcaggaagatgctaccaaagcactcgagtgcact
cacatgagcaagcttttagacagagtagtatctgttgagtacgcattaagggatgatgac
gagaggggtgacagctattacgatagccctagaaaaagaggttatggtgggcgtggggtt
agtccttacagaaggtcaccaagtccagcgtatcatagacgccgaagtcctgattatggt
cgtccaggtagccctgtttatgataggtacaatggtccagcatatgacaggcgcaggagt
cccgattatggcaggaacaggagtcctgaatatggccgaaacagaagccggtcacctata
cgaaggtcaagaacttga
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