Carya illinoinensis (pecan): 122311886
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Entry
122311886 CDS
T08745
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122311886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122311886
03036 Chromosome and associated proteins [BR:
cill03036
]
122311886
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122311886
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122311886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_SCAP
eIF2A
Ge1_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Tricorn_2nd
RMC1_N
Beta-prop_VPS8
Kelch_1
WDR54
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
122311886
NCBI-ProteinID:
XP_042982586
LinkDB
All DBs
Position
5:complement(44702344..44705385)
Genome browser
AA seq
454 aa
AA seq
DB search
MDAGSWNSSVNLKDQSRCPLQEQFMQRKNARENLDRFIPNRSAMDFDYAHYMLTGGRKGK
ENPASSSPSREAYRTRLAETFNMNRTRILAFKNKPPVPVESFPREFSSSVNHDKPTKSRR
HIPQTSERTLDAPDLVDDYYLNLLDWGSCNVLAIALGNTVYLWDASNGSTSELVSIDEGD
GPITSVNWAPDGRHIAIGLNNSEVQLWDSTANRQLRTLRGGHRSRVGSLAWNNHILATGG
MDGMIINNDVRIREHIVETYRGHEQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSNS
ATQWLHRLEDHISAVKALAWCPFQSNLLASGGGGGDRCIKFWNTHTGACLNSVDTGSQVC
ALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAA
DETLRFWNVFGVPEVAKPAPKSNPEPFAHVNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcatggaattcttctgtgaacttgaaggaccaatctcggtgcccactt
caagaacagtttatgcagagaaagaacgctcgggaaaatttggatagattcataccgaac
agatcagcaatggacttcgattacgcacattacatgctgacaggagggaggaaaggtaag
gagaacccagcttcaagctcaccatcaagagaggcctacaggacgcggctggctgagacg
ttcaacatgaaccggacccgaatcctcgccttcaaaaacaagccgcctgtcccggtggag
tccttcccgcgtgagttctcctcttctgtcaaccatgataagcctacgaagtcccggcga
cacattcctcagacttctgagagaacattagatgctcccgacctggttgatgattactac
ctaaatttattggactggggaagctgcaacgttctcgcaattgctcttggaaatacggtt
tatctctgggatgcttcgaacggttctacttctgaacttgtgagtattgacgagggagat
ggccccattaccagtgttaactgggctcctgatggccggcacattgccattggtttgaac
aattctgaagtacagctttgggattcaacagcaaatcgacagctaagaacattgcgcggt
ggtcacagatcacgagtggggtcgttggcatggaacaatcatatccttgcaactggagga
atggacggcatgatcatcaacaacgatgtaagaattagagaacacattgttgaaacctac
agagggcatgaacaagaggtttgtgggctaaaatggtcggcctcaggtcagcaattggcg
agtggaggtaacgataatctcctccacatctgggacagatcaatggcatcctcaaattca
gcaacacagtggcttcacaggctcgaggaccatatatctgccgtgaaagctctcgcttgg
tgtcctttccagagcaatttgcttgcctctggtggaggtggaggcgataggtgcataaag
ttctggaatacccatacgggtgcgtgcttgaactcggtggacactggctcgcaggtttgt
gctctgttatggaacaagaacgaaagagagttgcttagctctcatgggtttactcagaat
cagctcacactttggaagtacccatcaatggtgaagatggcagagctaaatggtcatact
tctagagttcttttcatggctcagagcccagatggttgcacggtggcatcggcggcagct
gatgaaacactcagattctggaacgtctttggggtcccggaagtggctaaacctgctcct
aaatcaaaccctgagccctttgctcacgtgaatcgtatccgatag
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