Carya illinoinensis (pecan): 122311923
Help
Entry
122311923 CDS
T08745
Name
(RefSeq) two-component response regulator ARR11-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122311923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122311923
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122311923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122311923
NCBI-ProteinID:
XP_042982633
LinkDB
All DBs
Position
5:complement(30714136..30718859)
Genome browser
AA seq
583 aa
AA seq
DB search
MENGFPSTRNDSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERK
DGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI
RMKELRNIWQHVFRKKIHEIRDIEGHESFEGIQISRNGSDLSDDGHMFCGEDMTSIKKRK
DFDNKYDEKDLGDHSSSKKHRVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR
ENVASHLQKYRLYLSRLQKESDLKASFGGIKHPDMHLKDPAGSFGLQSSINTNQNDVANG
RFQFSAHKLFGQDVNVKIQEGDLKGIFSEHMPDTKKTLNADNPDPQETSSHMSFDHSFAT
LGSEVNYEAFDCHIWNEAPKIELKREHKPLLQLEDGFSQLPPCAPEHHVKTDKLHPVPSV
TSGLSLTARDVSGPIKNEPLYAEYQGNRVSHVSPKKCAIESFPIQSKGHMVVNHQSYEPV
STAISSMKPQGFNLSCLTDFDYCQRNLKASDSTLAPFNETACLLQGDFHNKYFGLPNIEF
TDCNDPSFIAEIPVHWYDTLTSDYECPLDPTEYSIFDQGLFIA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggcttcccttctactcggaacgattcgttcccagccggtctccgcgttctc
gtcgttgatgacgatccgacatggctcaaaatcctcgaaaagatgctcaagaagtgctcc
tacgaggtgactacgtgtggtttggcaagagatgctctgaacttgctgcgtgaaaggaaa
gacgggtatgatatcgtaatcagcgatgtcaacatgcctgacatggatggttttaaactg
ctagagcacgttggactggaaatggatcttcctgtcattatgatgtctgttgatggagag
acaagcagggtgatgaagggggttcagcatggagcctgcgattatctcctgaagccaata
aggatgaaagaactccggaatatatggcagcatgtcttcaggaaaaaaatacatgaaata
agggatattgagggtcatgaaagttttgaaggtatccaaatatcaagaaatggatcagat
ctatctgatgatgggcacatgttttgtggagaagatatgacctcaataaagaaaagaaaa
gattttgacaataaatatgatgagaaagacttaggtgatcattcttcttcaaagaaacat
agagttgtttggtcagtagatctgcaccagaaatttgtcaaggctgtaaatcagattggt
tttgataaagttggccccaaaaagatactcgatttgatgaatgtgccttggctcactaga
gaaaatgttgctagtcacttgcagaagtaccgcctctacttgagtagattgcagaaagaa
agtgatttaaaagcttcttttggagggataaagcatcctgatatgcatttgaaggatcct
gctggaagttttggccttcagagttcaatcaacacaaaccaaaatgacgttgctaacggt
aggtttcaattttctgcacataaattatttggtcaggatgtgaatgtcaaaatccaagaa
ggggatctgaagggaattttctcagagcacatgccagataccaaaaaaaccttgaatgct
gataatcctgatcctcaggagacgagttcacacatgagcttcgatcattcttttgcaaca
ctgggatcagaagtaaactatgaagcatttgactgtcacatttggaatgaagctcctaaa
attgaactcaaacgagaacataagccgcttcttcagttggaggacggctttagccagctg
ccaccatgtgctccagaacatcacgtcaaaactgataaactacatccagtcccatctgtt
acttctggactttctttgacagcaagagacgtaagtggtcctataaaaaatgaacctttg
tatgccgagtaccagggcaatcgtgtgagtcatgtcagtccaaagaaatgtgcaattgaa
agttttcctattcaatccaagggccacatggtggtgaaccatcaatcttatgagcccgtt
tccacagcaatatcaagcatgaaaccacagggcttcaacctgagttgccttactgacttt
gattattgccaaagaaacctgaaagcaagtgactcaactttggcaccattcaatgagaca
gcttgtttactgcaaggtgattttcataataagtattttggactcccaaatatagagttt
actgactgcaatgatccaagcttcattgccgaaattccagttcactggtatgacacactg
acttctgactacgagtgtccccttgacccaacagagtattccattttcgatcaaggtcta
tttatagcatga
DBGET
integrated database retrieval system
