Carya illinoinensis (pecan): 122311935
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Entry
122311935 CDS
T08745
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122311935
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122311935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
MoaF_C
Motif
Other DBs
NCBI-GeneID:
122311935
NCBI-ProteinID:
XP_042982648
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All DBs
Position
5:complement(34703951..34748044)
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AA seq
1607 aa
AA seq
DB search
MDQTQHQRPVQASAQAPASASRAYQFHPARAAIVDLFDLYLGRSSRQKPEDSSREPPNKT
QKRVHALNRELPPRNEQFLIDFEQLQSQFAEQDQLRSVTESIFISLVVKCSGHAPRAEFL
LFALRNLCTIGFINWDTLLPSLLSSVSSAEMTVGSQAMPAVSSTSLPQTGMLPPSSSIPN
PSTFQSSNPASPLTTVHGIGSPAQCALEPPSCATLSPVKSSDILCNGQQPMARINSSIRD
NAISSLRQLCCKIILTGLEFDLKPVTHAEIFYHMLNWLVNWDQRQQGIDEFDGAKSWRPH
KALIEWLHSCLDVIWLLVEEDKCRVPYYELLRSGLQFIENIPDDEALFTLILEIHRRRDM
MAMHMQMLDQHLHCPTFGTHRVLSQTTPSISGEANARYSPITYPSVLGEPLHGEDLAMSI
QKGSLDWERALRCIRHALRSTPSPDWWKRVLLVAPSYRSPQASTPGAVFTSEMICEATID
RIVELLKFTNSEINCWQEWLVFSDIFFFLMKSGCIDFVDFVDKLVSRVMEGDQHILRTNH
VTWLLVQLLRVELVTNALNSDARKVETTRKVLSFHREDRSSDPNNPQSILLDFISSCQNL
RIWSFNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSIGMFWVVSYTMAQ
PACETVMNWLSSAGVTEFLPGPNLQSNERLMVMREVSPLPMSLLCGFSMNLCLKLAHQME
ETLFSGQGVPNIAMVETYTRLLLIAPHSLFRSHFSNLAQRNPSLLSKPGVTLLVLEILNY
RLLPLYRYEGKSKALMYDVTKIISTLKGKRGDHRVFRLAENLCMNLIFSLRDFFPVKREG
KGPTEFTETLNRITVITLAITIKTRGIADADHLLYLQTMLEQIMATSLHTWSEKTLRYFP
SVLREALMGRMDKRSLEIQAWQKAETTVINQCTQLLSPSADPSYVTTYISHSFPMHRRYL
CAGAWILMHGHPENINSINLARVLREFSPEDVTENIYTMVDVLVHHIQMELQHGHLSQDL
VLKASANLTFFVWTHELLPLDILLLALIDRDDDPHALHIVINLLERQEILQRVKQYCVNH
GPPEHWLQSGMFKRVELQKALGNHLSWKDRYPTFFDDAAARLLPVVPLIIYRLIENDATE
PAEIILVKYSQFLALHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDLSKIPFSESFPQH
ISSSNPVMCPPMDYFATLLLGLVNNVIPPLQNNSRFGSMCDPSGRTPYNKTAATSQSGLA
NASEGQKSFYQIQDPGTYTQLVLETAVIELLSLPVSASQIVSSLVQIVVNIQPTLIQSSN
GLHGAPNGVGQASVLPTSPSGGSTDSLSAGRSTPLVSGINTSNIVSRSGYTCQQLSCLLI
QACGLLLAQLPPEFHLQLYAEASRIIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDN
TSTAIGNMVALLHSFFSNLPQEWLEGTHVIIKHLRPVTSVAMLRIAFRIMGPLLPRLANA
HSLFNKTLSLLLSILVDVFGRNSQTSTPVEASEIADLIDFLHHVIHYEGQGGPVQANSKP
RPEVLALCGRASENLRLDVQHLLSHLKADVNSSIYAATHPKLVQNPS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacccaacatcagcgacccgttcaggcttcggctcaagctccggcttcggct
tctcgggcctaccagttccaccctgcccgtgccgccattgttgatctcttcgacctctac
ttgggaagaagtagccgtcagaaacctgaagactctagtcgagaacctccgaacaagaca
cagaagcgtgtgcatgcgctaaacagagaacttcctcctcgcaatgagcagttcctcata
gattttgagcaacttcagagccagtttgcagagcaagatcagttgcgttctgtgacagaa
tctatttttatatctctggttgtgaagtgtagtggtcatgcaccacgagctgaatttctt
ctctttgctttacggaacttgtgcactataggtttcattaattgggatactcttttgcca
tctctgctttcatcagtctcctctgcagagatgactgtggggagtcaagcaatgcctgct
gtttcatctacaagtttaccacagactgggatgctgccaccttcaagctcaattccgaat
ccttctacttttcagtcctcaaatccggcatctccattaactacagttcatggtattggg
tcccctgctcaatgtgctcttgaaccaccatcttgtgcaactttgtcaccagtcaaatca
tctgatattttgtgtaatggacaacaacctatggcaaggataaattcatcaataagagac
aatgctataagcagtctgcggcaactgtgttgcaagattattttaactggtcttgaattt
gatttaaaaccagtgactcatgctgaaattttctaccacatgctgaattggctggtcaat
tgggatcaaagacagcaggggattgatgaattcgatggagcaaaatcttggagaccacac
aaggctcttattgaatggctgcacagttgtttggatgtgatttggcttttagtcgaagag
gataaatgccgagtaccctattatgaattactgcgcagtggcttgcagtttatagaaaac
atacctgatgatgaagccttatttacactaatcttggagatccatagaaggcgagatatg
atggctatgcacatgcaaatgttagatcaacaccttcattgccctacctttggaactcat
cgagttctatctcagacaactcccagtatttcaggtgaagcgaatgcacgatattcaccg
atcacctacccaagcgtacttggagaacccttgcatggagaggatcttgcgatgtctatt
cagaagggaagtttagactgggagagggctttgcgttgcataaggcatgctcttcgcagt
actccttcacctgattggtggaagcgggtgcttcttgtggctccttcctataggtctccc
caagcatccactcccggtgctgtttttacttctgaaatgatctgcgaggcaacaattgat
agaattgttgaactcttgaagtttacgaattcagagataaattgctggcaggagtggctt
gtcttttcagatatcttcttttttcttatgaaaagtgggtgtattgactttgttgatttt
gtggacaagctagtttcacgggttatggagggtgatcagcacattcttagaacgaatcat
gtgacttggttacttgtacaacttctaagggttgagcttgtgacaaatgctctgaattca
gatgcgagaaaggttgagacgaccagaaaagttctatcatttcatagagaagatagaagc
tctgatcctaataatcctcaaagtatccttcttgactttattagtagttgccaaaatttg
cgtatttggtcattcaacacatccaccagggaatatttgaataatgagcagcttcagaag
ggaaagcaaatagatgaatggtggaggcaagtgagtaaaggggatcgcatgatggattac
atgaatatggatgatagatcaattgggatgttctgggttgtgtcttacaccatggcacaa
cctgcttgcgaaacagtaatgaattggctttcgtctgctggagttacagaattcttacca
ggaccaaatctacagtccaatgagaggttaatggttatgcgagaagtaagccctttgcca
atgtcattattatgtggcttttccatgaacctatgcttgaagctggcccatcaaatggaa
gaaactttattttctgggcagggtgtgcccaacattgctatggttgaaacgtatacgaga
ttgctgctcattgcacctcactcattattccgttcacacttcagcaatttggcacagagg
aacccatctttattgagcaagcccggggtaacactattggtgcttgaaattttgaactac
cgtttgcttccactatacaggtatgaaggaaaaagcaaagccttgatgtatgatgtcaca
aaaataatttctacactaaaagggaaacgtggagatcatcgtgtatttagattggctgaa
aacttgtgcatgaatcttattttctcactcagagattttttcccagttaaaagggaagga
aagggtcctacagaattcacagaaaccctaaatcggattaccgtaataactcttgccata
accattaaaacacgtggaattgccgatgcagatcacctgctttaccttcaaactatgtta
gaacagataatggcaaccagtctacatacatggtctgaaaaaacgctgcggtactttcct
tctgttctacgtgaggccttaatgggtcggatggataagaggagcctggagattcaagca
tggcagaaggcagaaacaactgtgattaaccaatgcacgcaacttctttcaccatcagct
gatccttcttacgttacaacctacatcagtcacagtttccctatgcaccgacgatatctt
tgtgctggagcttggatactgatgcatgggcacccagagaacataaacagtataaacttg
gcacgtgtgctgagggagttttccccagaagatgttacagagaatatttacacaatggtg
gatgtactagtacatcatattcagatggaacttcagcatggacatctctcgcaggacctt
gtattaaaagcctctgcaaaccttacattttttgtctggacccatgagttgcttcccttg
gatattttgcttctagcacttatcgaccgtgacgatgatccccatgctttgcatatagtg
attaatctccttgagaggcaagagattctacaaagagtgaaacaatattgtgtgaatcat
ggacctccagagcattggcttcaatctgggatgttcaagcgagttgagttgcagaaggct
cttgggaatcatctctcatggaaggacaggtatcccacattctttgatgatgctgcagca
cgtttacttccagttgtgcccttaattatttatagacttattgagaatgatgccacggaa
ccagctgaaataattctagtcaaatattcccagtttcttgctttacaccccctaagattt
acattcgtccgtgacatacttgcatatttctatggtcatcttcctgggaagctcatagtc
cggatattgaatgtacttgatctcagcaagatacctttttcagagtctttcccgcagcac
attagttcatcaaatccggtcatgtgcccacctatggactatttcgctactctcttattg
ggacttgtgaataacgttatacctccactacaaaacaactccagatttggatcaatgtgt
gatccctcagggcgtactccatataataagactgcagcaacttctcagtctgggctggca
aatgcttctgagggccaaaagtcattctatcaaattcaggatcctggcacctatactcag
cttgttcttgaaactgctgttatagaattactctctctccctgtgtctgcatctcagatt
gtgtcttcgctggtccagatagtcgtcaatatacagccaacactaattcaatccagcaat
ggtctacatggagctccaaatggtgttgggcaagcttcagtattgcctacatccccttca
gggggaagcacagattccctgagcgcaggcagatcaactcctttagtttcaggaattaat
acctcgaatattgtttctcgaagtggttatacatgccaacaactgtcttgcttactgata
caagcttgtggtctcctacttgctcagctcccccctgaatttcacttgcaactttatgcg
gaggcatcacgtataataaaagagagttggtggctcacggatgggaagaggtcactggga
gaactagactctgctgttggctatgctttgttggatccaacatgggccgctcaagacaat
acctcaacggctattggtaatatggttgccctcctgcattcatttttcagtaacctccca
caggaatggctagaagggacccatgtcatcattaagcatctcagaccagtgacatcagtc
gcaatgttgagaatagcatttcgtataatgggcccgttgctcccaagacttgccaatgct
catagtctcttcaataagaccctctccttacttttaagcatactggttgatgtcttcgga
aggaattcacagacatcaactcctgtagaagcatcagaaatagcagatctcatagacttc
ctccatcatgttatccattatgaagggcagggagggcctgtgcaagctaacagcaaacct
cgaccagaggtattggctctctgtgggagagcatcagaaaatttacgtctagatgtacag
catcttctgtcccatctaaaagctgatgtaaattcttccatctatgctgctactcatcca
aagctggtccagaatccatcataa
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integrated database retrieval system
