Carya illinoinensis (pecan): 122311973
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Entry
122311973 CDS
T08745
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122311973
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122311973
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122311973
NCBI-ProteinID:
XP_042982710
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Position
5:31200574..31202649
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AA seq
402 aa
AA seq
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MAIPLTFLVLLALLAPNSISSTPVQDPELVVQEVNMNISASRRNLGFLSCGTGNPIDDCW
RCDPNWEQNRQRLADCAIGFGKHAIGGRDGKIYVVTDASDNDPVNPKPGTLRHAVIQDEP
LWIIFKSDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAYVRDSPGHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCYDGLVDAIHGATAITISN
NYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYSHWE
MYAIGGSADPTINSQGNRFLAPNDEFNKEVTKHEDAPQSQWKNWNWRSEGDLLLNGAFFT
PSGAGASSSYSKASSLGARPSSLVSTITAGAGSLKCKKGSHC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccgctcacttttttagtccttttggctcttctagctccaaactccatctcc
tcaacaccagttcaagacccagaactagtagtgcaagaagtaaatatgaacataagtgcc
tccaggagaaacttgggctttctctcttgtgggaccggaaatcccatcgatgactgctgg
aggtgcgacccgaattgggagcagaaccggcaacggctagccgactgtgcaattgggttt
ggaaagcatgctatcggcggcagagacgggaagatatatgtggtcaccgacgccagcgat
aatgaccctgtgaatcccaaaccaggcactcttaggcacgctgtgatccaagacgagccc
ctttggatcatcttcaagagtgacatggtgattaagctgaaggaagagctaatcatgaac
tctttcaagacgattgatgggcgtggtgcgagcgtgcacattgccggggggccatgcatt
actatccagtacgtgaccaacattattattcatggcctcaacatccatgactgcaagcaa
ggtgggaatgcctatgtaagggactctcctggacattatggctggaggacagtctccgac
ggcgacggtgtctcgatcttcgggggaagccacgtttgggtggatcattgctctttatct
aattgctatgatgggctagttgatgccattcatggagccacagcaatcaccatctctaac
aattatatgacccaccataacaaggtcatgctcttgggccatagtgattcctacacacaa
gacaaaaacatgcaagtcactatagcattcaaccattttggagaagggcttgtacagagg
atgccaagatgtagacatgggtatttccatgtggtgaacaatgactattcccattgggaa
atgtatgcaattggtggcagtgctgatccaactattaacagtcaagggaacagatttctc
gctcccaatgacgaatttaacaaggaggttaccaaacacgaggatgcaccacagagccag
tggaagaattggaactggagatccgaaggagatttgctgttgaatggtgcttttttcact
ccctcgggtgccggagcatcttcaagttactccaaggcatcaagcttgggagcaagacca
tcttccctcgtgagcacaatcacagctggtgcaggttcacttaagtgcaagaagggctcg
cattgctga
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