Carya illinoinensis (pecan): 122311977
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Entry
122311977 CDS
T08745
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122311977
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122311977
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122311977
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
122311977
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122311977
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122311977
Prokaryotic type
122311977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
DALR_2
CysS_C
IL28A
Motif
Other DBs
NCBI-GeneID:
122311977
NCBI-ProteinID:
XP_042982712
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All DBs
Position
5:45322677..45329472
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AA seq
527 aa
AA seq
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MANGEEFRVYNSMTQQKEIFKTHEPGRVGMYVCGVTAYDLSHIGHARAAVSFDILFRYLQ
HLGYQVTYVRNFTDVDDKIFRRANELGEEPLSLSNRFCEEYLVDMADLQCLLPTHQPRVS
DHMEQIKDMISQIINNDCAYLIDGDVFFSVDKSPNYGQLSGQKLEDHRAGERVAVDSRKR
NPADFALWKAAKPGELSWDSPWGPGRPGWHIECSAMSAHYLSFQFDIHGGGIDLIFPHHE
NEIAQTCAACQESGVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITQRYHPLALRHFLISA
HYRSPLNYTVSQLDSASDAVYYIYQTLQDCEDALSPFQGGRLKEVPEQKDKTVRITSAAR
ECISNLRSEFQTKMSDDLNTAQILTVAFQEALKFINTSLNMLKKKQQKQQQLSMIESLIA
VEKEVKEVLNILGLLPSSTYLEVLEQLKDKALKRAGMVENDVLHLIEERTLARKNKDFSK
SDQIRADLTVKGIALMDVGDGTIWRPCVPVEQEHNALPVEQTASTTG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggggaggaatttcgtgtgtacaactccatgactcagcagaaggagatcttc
aagacgcacgagccggggcgtgttggcatgtacgtctgtggcgtcaccgcctacgacctc
agccacatcggccacgctcgcgccgccgtcagtttcgacatccttttcagatacttgcag
cacttgggctatcaagttacttacgtgcggaatttcactgatgttgatgacaagatattt
cgtagagcaaatgagcttggggaggaacccttaagtttaagtaatcgtttttgcgaagaa
tatcttgtcgacatggctgatcttcagtgcctccttccaacccatcagcctcgcgtttcc
gatcacatggaacagataaaggatatgataagtcagattatcaacaatgattgtgcgtac
ttgattgatggagatgtattcttttctgttgataaatccccaaattatggccagttatct
gggcagaaattggaagaccacagggctggtgaacgagttgctgttgactcaagaaagcgt
aatccagctgacttcgcattgtggaaggcagcaaaacctggcgagctaagttgggacagt
ccatggggtcctggaagaccggggtggcacatagaatgcagtgcaatgagtgctcattac
ctttctttccaatttgatattcatggtggtggaattgatttgatctttccacatcatgaa
aatgagattgcacagacctgtgctgcttgccaagagagcggtgtgagttactggatgcat
aatgggcatgtcactaataacaatgagaaaatgtccaagtcattgggtaattttttcaca
attcgtcagataactcaacggtatcatccgctggctttgaggcattttctgataagcgca
cactatagatctcctctcaattatacagtctcacagctggatagtgcatcagatgctgtt
tattacatatatcagactttgcaagactgtgaagatgctttatccccattccaaggagga
agacttaaggaggtgccagaacagaaagacaaaacagtgcgaattacttctgctgcccga
gagtgcatcagtaacctacgcagtgagtttcagactaaaatgtcagatgacttgaacact
gcacagatattgactgttgcttttcaagaagccttgaagttcataaacacttctttgaac
atgctcaagaagaagcaacagaagcaacaacagttatcgatgattgagtctcttatcgca
gtagagaaagaagttaaagaagttcttaatattctagggttactaccctcttccacgtac
ttggaggttctggagcaattaaaggacaaggctttgaagagagcagggatggtggaaaat
gatgtgttgcatctgattgaagaaagaactctagcaaggaaaaacaaggatttctccaag
agtgatcagatcagggctgatttaactgtgaagggcattgcgctgatggatgtgggcgat
ggaactatttggagaccatgtgtcccagttgaacaggaacataatgccctgccagttgaa
caaacagccagcaccactggttga
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