Carya illinoinensis (pecan): 122312306
Help
Entry
122312306 CDS
T08745
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like isoform X1
KO
K04523
ubiquilin
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122312306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122312306
03051 Proteasome [BR:
cill03051
]
122312306
Membrane trafficking [BR:
cill04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
122312306
Proteasome [BR:
cill03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122312306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
XPC-binding
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
UBA_NBR1_C
UBA_HOIP
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122312306
NCBI-ProteinID:
XP_042982795
LinkDB
All DBs
Position
6:complement(31223714..31228228)
Genome browser
AA seq
583 aa
AA seq
DB search
MKMNSNNKKQQSLASGTQSPNPKSITMGSEGDSSEPRVGGGEEEHVAINIRCSNGSKFTV
RTSLASTVSAFKAVLAQNCDVLADQQRLIYKGRILKDDQTLESYGLQAEHTVHMVRGFAS
AASTPAANATATGNSGSPNNSPGVTRGVGPNEGGGLGNAGLGASLFPGLGFNALGSGDES
GLFGAGLPEFEQVQQQLTQNPNMMQEIMNMPAMQSLMNNPELMRSLIMNNPQMREIIDRN
PELAHVLNDPGILRQTVEAARNPELMREMMRNTDRAMSNIESTPEGFNMLRRMYENVQEP
FLNATTMGGNAGNDPSSNPFAALFGNQGGTHVRDGANNPLTTGSETTSGLSSPNTNPLPN
PWNNTAGGTQTTTTQPNPAGDAGAPGIGGLGGLGLPNMEHMFNGGIPDATLLSQFLQNPA
VSQMMQSLLSNPQYMNQILSLNPQLRGMVDTNPQLREMMQNPDLLRQLTNPETMQQMLAL
QQSLASRLSQRQSTLDRDQTGGTTGAPNNAALELMMNMFGGLGAGSLTVPNNPDVPPEEL
YATQLSQLQEMGFFDTQENIRALRATAGNVHAAVERLLGNSGL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaacagtaataacaaaaaacaacaatctctcgcgtcgggcacccaaagtcca
aaccccaaatcgattactatgggttccgagggtgattcgagcgagccgagagtcggtggt
ggtgaagaagaacatgtggcgatcaatatccggtgctccaacggttcgaaattcactgtg
aggaccagccttgcgtccaccgttagcgcattcaaagcggttctggctcagaattgcgac
gtcctggctgatcagcagagattgatttacaaaggtcgcatcttgaaggatgatcaaacc
ctagaaagctatggtttgcaggcagaacacactgttcacatggttcgtgggtttgcttca
gctgcatcaactcctgctgcaaatgctactgctactggtaactctggaagtcccaacaat
agtccaggtgttacacggggtgttggtccaaatgaaggtggaggcttgggaaatgctggt
cttggtgcgtctttatttcctggactgggctttaatgcactaggcagtggggacgaatct
ggtttgtttggagctggactgccagagtttgaacaagtgcagcaacaattgactcagaat
ccaaacatgatgcaagaaataatgaacatgcctgccatgcagagcctaatgaacaacccc
gagttaatgcgcagcttgattatgaacaatcctcagatgcgtgagatcatcgaccgtaat
ccagagcttgctcatgtacttaatgaccctgggattcttagacagacggtagaagctgca
aggaaccctgagcttatgcgtgagatgatgcgaaacactgacagggcgatgagcaacatt
gaatctaccccagagggatttaacatgctcagacgaatgtacgaaaatgttcaggaacca
tttctgaatgctacaacaatgggtggaaatgctggaaatgatccaagttcaaacccgttt
gcagcactttttggaaatcaaggtgggacacatgtcagagatggtgctaataaccccttg
actactggttctgaaacaaccagtgggcttagttctccaaatacaaacccactccctaac
ccttggaacaatactgctggaggtactcagacaacaactacacaaccaaatcctgctggg
gatgccggggcacctggtattggtggtcttggagggcttggtctccccaatatggaacac
atgtttaatggtggcatcccagatgctactctactgagccagttcttgcagaacccagct
gtatcacagatgatgcaaagcttgctctctaatccccaatatatgaatcagattctcagc
ctcaacccacaactacgtggcatggtagatacgaatcctcaattaagagaaatgatgcaa
aatccagatcttctacgtcaattaaccaaccctgagacaatgcagcaaatgctagcttta
cagcaatcacttgcgtctcggcttagtcaacggcaatcaaccctggatcgagatcagact
ggggggactacaggagcaccgaataatgctgcactggagctgatgatgaacatgtttggt
ggtcttggagctggaagcttgactgttccaaataacccagatgtacccccggaagaacta
tatgcaactcagctttcacagctccaagaaatgggtttctttgatactcaggagaatatc
agagcactgcgtgctacagctgggaatgtccatgctgcagttgagcgacttttgggtaat
tccgggctataa
DBGET
integrated database retrieval system
